Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 HMGN2P39-201ENST00000398005 273 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 MIR1302-5-201ENST00000408164 150 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 HMGN2P3-201ENST00000433603 273 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 HMGN2P5-201ENST00000436882 273 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 RNU7-164P-201ENST00000459221 62 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 RNA5SP168-201ENST00000516642 112 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 IGLV3-17-201ENST00000519099 244 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 MIR4305-201ENST00000583252 102 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 U4.6-201ENST00000621618 127 ntBASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
DEPDC4Q8N2C3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 RNU6-766P-201ENST00000362478 107 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 Y_RNA.163-201ENST00000363702 113 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 SNORA25.6-201ENST00000364121 118 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 AC115115.1-201ENST00000449927 248 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 BX510359.1-201ENST00000456973 237 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 RNU6-998P-201ENST00000515894 101 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 SUMO2P16-201ENST00000519475 264 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 SUB1P4-201ENST00000566062 339 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 AC002984.1-201ENST00000591692 448 ntBASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.07□□□□□ -1.92
DEPDC4Q8N2C3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 Y_RNA.241-201ENST00000364470 117 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 RNA5SP492-201ENST00000411330 114 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 RNU1-143P-201ENST00000516296 146 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 U1.23-201ENST00000610293 146 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 RNU1-68P-201ENST00000615382 146 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 U1.39-201ENST00000621562 146 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 AL035470.1-201ENST00000622571 220 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 AC106754.2-201ENST00000623006 233 ntBASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
DEPDC4Q8N2C3 AL596211.1-201ENST00000569873 2277 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 AC108206.1-201ENST00000570186 4159 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 SNORA1.2-201ENST00000365189 134 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 Y_RNA.362-201ENST00000365518 110 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 RNU6-1014P-201ENST00000383940 103 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 MIR452-201ENST00000385020 85 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 SNORA48.2-201ENST00000390926 124 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 RNVU1-2-201ENST00000516326 135 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 RNA5SP481-201ENST00000516814 122 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 IGKV3-31-201ENST00000523109 329 ntBASIC3.05□□□□□ -1.92
DEPDC4Q8N2C3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 RNU6-414P-201ENST00000363705 104 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 RNU6-1113P-201ENST00000384348 107 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 MIR1267-201ENST00000408723 78 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 RN7SKP111-201ENST00000410349 271 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 RPL39P34-201ENST00000477141 156 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 RNU7-123P-201ENST00000515911 60 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 RNU7-12P-201ENST00000516030 62 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 MIR3163-201ENST00000581592 73 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 uc_338.1-201ENST00000612113 180 ntBASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.04□□□□□ -1.92
DEPDC4Q8N2C3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 Y_RNA.328-201ENST00000365208 113 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 SNORA4.2-201ENST00000365313 147 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 AC107297.1-201ENST00000459991 176 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 Y_RNA.677-201ENST00000516401 85 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 SCARNA16.3-201ENST00000516595 184 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 SNORA70.18-201ENST00000516696 98 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 AC090821.2-201ENST00000523552 176 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 AL513423.1-201ENST00000621695 132 ntBASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
DEPDC4Q8N2C3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 SNORA63.5-201ENST00000363548 123 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 RNU6-112P-201ENST00000363599 104 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 RNU1-51P-201ENST00000365345 176 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 AL590004.2-201ENST00000404787 371 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms