Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNU6-1258P-201ENST00000516911 111 ntBASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 IGKV2-26-201ENST00000518305 343 ntBASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 uc_338.25-201ENST00000613756 156 ntBASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 MIR8057-201ENST00000620957 69 ntBASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SCUBE3Q8IX30 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 RNU6-509P-201ENST00000363519 107 ntBASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 SNORD114-6-201ENST00000364393 72 ntBASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 RNU6-424P-201ENST00000384367 105 ntBASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 MIR1289-1-201ENST00000408836 144 ntBASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 UBL5P3-201ENST00000475112 231 ntBASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 ELOCP29-201ENST00000588193 334 ntBASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
SCUBE3Q8IX30 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 SNORA25.6-201ENST00000364121 118 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 SNORA1.1-201ENST00000364671 133 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 Y_RNA.510-201ENST00000384511 114 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 AC069257.2-201ENST00000441819 155 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 AC108729.3-201ENST00000513484 108 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 RPPH1-2P-201ENST00000516688 293 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 SNORA70.19-201ENST00000516717 90 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 RNU6-667P-201ENST00000517186 102 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 IGLV3-17-201ENST00000519099 244 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 AC090821.2-201ENST00000523552 176 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 MIR548AE2-201ENST00000583456 67 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 AL355297.2-201ENST00000604792 129 ntBASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.61□□□□□ -1.83
SCUBE3Q8IX30 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 RNU6-633P-201ENST00000362612 103 ntBASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 Y_RNA.470-201ENST00000384307 117 ntBASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 MIR1267-201ENST00000408723 78 ntBASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 AC245047.3-201ENST00000429428 127 ntBASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 RNU7-45P-201ENST00000459460 63 ntBASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 RNU6-711P-201ENST00000517255 106 ntBASIC3.6□□□□□ -1.83
SCUBE3Q8IX30 PWAR6-201ENST00000552334 4618 ntBASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 RNU1-33P-201ENST00000364249 162 ntBASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 RNU6-163P-201ENST00000384396 106 ntBASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 MIR592-201ENST00000384959 97 ntBASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCUBE3Q8IX30 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
SCUBE3Q8IX30 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 RNU6-862P-201ENST00000362804 105 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 Y_RNA.99-201ENST00000363138 105 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 AC005326.1-201ENST00000429197 123 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 MIR1270-201ENST00000459320 83 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 RNU6-1006P-201ENST00000516998 103 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 RNU6-86P-201ENST00000606534 107 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 XIST_intron.1-201ENST00000619444 68 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 AL442644.1-201ENST00000454390 3105 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 AC017071.1-201ENST00000564407 2204 ntBASIC3.58□□□□□ -1.84
SCUBE3Q8IX30 AC096644.4-201ENST00000563417 2912 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 Z83843.1-201ENST00000604070 3685 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 Y_RNA.94-201ENST00000363068 106 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 RNA5SP139-201ENST00000364340 117 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 Y_RNA.316-201ENST00000365118 111 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 AC090844.1-201ENST00000422019 156 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 AC015922.2-201ENST00000435593 184 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 RNU6-1116P-201ENST00000517269 99 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 AC103810.7-201ENST00000607821 91 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 MIR376B-201ENST00000614515 100 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 AC027279.3-201ENST00000625055 122 ntBASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCUBE3Q8IX30 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 AC091152.2-201ENST00000591628 2569 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms