Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNORA2.2-201ENST00000365473 135 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 U8.17-201ENST00000391292 132 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 AC104389.3-201ENST00000445629 235 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 Z96811.1-201ENST00000445880 108 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 RNU7-164P-201ENST00000459221 62 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF135Q8IUD6 RNU7-123P-201ENST00000515911 60 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 AC022523.2-201ENST00000561045 150 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 MIR3163-201ENST00000581592 73 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF135Q8IUD6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
RNF135Q8IUD6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF135Q8IUD6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RNY1P1-201ENST00000364372 112 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RNU1-91P-201ENST00000364746 163 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RNU6-1189P-201ENST00000383958 107 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RNU6-816P-201ENST00000390914 107 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RNU6-1268P-201ENST00000391214 107 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RNU6-1239P-201ENST00000391310 107 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RPL39P39-201ENST00000455840 151 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RN7SL297P-201ENST00000483161 293 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 ZNF720P1-201ENST00000562403 1939 ntBASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF135Q8IUD6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF135Q8IUD6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF135Q8IUD6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF135Q8IUD6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF135Q8IUD6 SNORD115-28-201ENST00000363931 81 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 RNU6-268P-201ENST00000364174 107 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 Y_RNA.244-201ENST00000364484 109 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 MIR1912-201ENST00000410389 80 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 AC092427.1-202ENST00000430569 476 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 SNRPGP14-201ENST00000435400 219 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 AC099677.2-201ENST00000436385 175 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 RPL23AP67-201ENST00000465341 474 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 RNU2-13P-201ENST00000515909 113 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 SNORD45.4-201ENST00000516629 73 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 MIR3169-201ENST00000578032 83 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 MIR4435-1-201ENST00000582552 80 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 IGLL4P-201ENST00000614590 133 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.39□□□□□ -1.87
RNF135Q8IUD6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF135Q8IUD6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF135Q8IUD6 MAPK10-362ENST00000641864 4484 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF135Q8IUD6 RNU4-82P-201ENST00000362443 140 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 Y_RNA.37-201ENST00000362606 108 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 RNU1-70P-201ENST00000362618 164 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 RNU6-23P-201ENST00000363283 107 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 RNY1P6-201ENST00000384193 109 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 RNA5SP482-201ENST00000391269 118 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 AC245047.3-201ENST00000429428 127 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF135Q8IUD6 RNU6-237P-201ENST00000515985 71 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 RNA5SP367-201ENST00000516557 118 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 AC022254.1-201ENST00000567857 235 ntBASIC3.38□□□□□ -1.87
RNF135Q8IUD6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RNF135Q8IUD6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF135Q8IUD6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF135Q8IUD6 Y_RNA.73-201ENST00000362910 113 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 Y_RNA.336-201ENST00000365307 109 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 RNU6-497P-201ENST00000365316 104 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 RNU6-1276P-201ENST00000365372 104 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 Y_RNA.547-201ENST00000384654 119 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 AL606517.2-201ENST00000442855 241 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 UBBP3-201ENST00000445497 241 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF135Q8IUD6 RNU6-521P-201ENST00000516663 105 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 AC026271.5-201ENST00000577873 130 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.37□□□□□ -1.87
RNF135Q8IUD6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF135Q8IUD6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF135Q8IUD6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RNF135Q8IUD6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF135Q8IUD6 RNU6-242P-201ENST00000384359 107 ntBASIC3.36□□□□□ -1.87
RNF135Q8IUD6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RNF135Q8IUD6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF135Q8IUD6 Y_RNA.601-201ENST00000410500 113 ntBASIC3.36□□□□□ -1.87
RNF135Q8IUD6 AL445646.1-201ENST00000431784 216 ntBASIC3.36□□□□□ -1.87
RNF135Q8IUD6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF135Q8IUD6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF135Q8IUD6 AL109933.2-201ENST00000452651 260 ntBASIC3.36□□□□□ -1.87
RNF135Q8IUD6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF135Q8IUD6 RNU7-61P-201ENST00000515897 61 ntBASIC3.36□□□□□ -1.87
RNF135Q8IUD6 RNU7-28P-201ENST00000516759 62 ntBASIC3.36□□□□□ -1.87
RNF135Q8IUD6 RNU7-70P-201ENST00000516941 66 ntBASIC3.36□□□□□ -1.87
RNF135Q8IUD6 FAM35CP-201ENST00000554755 2470 ntBASIC3.36□□□□□ -1.87
RNF135Q8IUD6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF135Q8IUD6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF135Q8IUD6 AC092435.3-201ENST00000565538 3654 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 RNU6-1099P-201ENST00000363533 107 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 SNORA4.2-201ENST00000365313 147 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 SNORA80E-201ENST00000384744 137 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 SNORA11.4-201ENST00000408823 129 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF135Q8IUD6 HMGN1P18-201ENST00000457642 277 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms