Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC096949.1-201ENST00000412047 152 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 AC099677.2-201ENST00000436385 175 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 AC009969.1-201ENST00000438726 172 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 RNU7-80P-201ENST00000459562 61 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 S100A11P2-201ENST00000467589 312 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 SCARNA13-201ENST00000516672 275 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.73□□□□□ -1.97
ATG4DQ86TL0 AL033523.1-201ENST00000605153 153 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 AC064859.1-201ENST00000624741 174 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4DQ86TL0 AC091564.4-201ENST00000533934 2194 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
ATG4DQ86TL0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ATG4DQ86TL0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATG4DQ86TL0 RNU1-23P-201ENST00000363361 144 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 RNU4-67P-201ENST00000364569 141 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 RNU6-60P-201ENST00000364792 103 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 Y_RNA.454-201ENST00000384224 113 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 SNORD116-22-201ENST00000384430 92 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 RN7SKP200-201ENST00000410564 320 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 MRPL35P3-201ENST00000421557 364 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 AL353813.1-201ENST00000440700 253 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 AL358944.1-201ENST00000528537 144 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4DQ86TL0 MIR4666B-201ENST00000578142 81 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.72□□□□□ -1.97
ATG4DQ86TL0 SNORD115-13-201ENST00000363358 82 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORD115-16-201ENST00000363887 82 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 RNU6-219P-201ENST00000364728 107 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORD115-1-201ENST00000364961 82 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORD115-35-201ENST00000365122 82 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORA18-201ENST00000384416 132 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORA44-201ENST00000384584 132 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 RNU11-5P-201ENST00000391216 129 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORA7.5-201ENST00000410672 110 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.71□□□□□ -1.98
ATG4DQ86TL0 AL161788.1-201ENST00000441805 169 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 RPS23P4-201ENST00000487908 423 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORA31.1-201ENST00000515993 133 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORA31.5-201ENST00000516190 133 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 RNU1-142P-201ENST00000516682 145 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 SNORD59.2-201ENST00000516873 68 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 RNA5SP380-201ENST00000517190 98 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 AC004812.1-201ENST00000540773 146 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 MIR4778-201ENST00000577635 80 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 MIR338-201ENST00000636369 67 ntBASIC2.71□□□□□ -1.98
ATG4DQ86TL0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ATG4DQ86TL0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.7□□□□□ -1.98
ATG4DQ86TL0 RNU6-661P-201ENST00000362409 107 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 Y_RNA.467-201ENST00000384297 102 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 RNA5SP144-201ENST00000410846 116 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.7□□□□□ -1.98
ATG4DQ86TL0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
ATG4DQ86TL0 RNU7-171P-201ENST00000459581 62 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 RNA5SP385-201ENST00000515947 110 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 SNORA31.4-201ENST00000516049 129 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 SNORD45.4-201ENST00000516629 73 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 AP002004.2-201ENST00000531656 154 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 AC078899.2-201ENST00000595282 212 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.7□□□□□ -1.98
ATG4DQ86TL0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 UCA1.1-201ENST00000620952 75 ntBASIC2.7□□□□□ -1.98
ATG4DQ86TL0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
ATG4DQ86TL0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
ATG4DQ86TL0 SNORD115-19-201ENST00000363098 82 ntBASIC2.69□□□□□ -1.98
ATG4DQ86TL0 SNORD115-18-201ENST00000363293 82 ntBASIC2.69□□□□□ -1.98
ATG4DQ86TL0 SNORA71.1-201ENST00000364523 117 ntBASIC2.69□□□□□ -1.98
ATG4DQ86TL0 SNORD115-17-201ENST00000364612 82 ntBASIC2.69□□□□□ -1.98
ATG4DQ86TL0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4DQ86TL0 SNORA8-201ENST00000384574 139 ntBASIC2.69□□□□□ -1.98
ATG4DQ86TL0 RNU6-679P-201ENST00000391003 106 ntBASIC2.69□□□□□ -1.98
ATG4DQ86TL0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.69□□□□□ -1.98
ATG4DQ86TL0 AL137790.1-201ENST00000634283 177 ntBASIC2.69□□□□□ -1.98
ATG4DQ86TL0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4DQ86TL0 AC008264.2-201ENST00000610193 3731 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATG4DQ86TL0 RNU6-24P-201ENST00000384440 107 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 RNA5SP323-201ENST00000391094 133 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.68□□□□□ -1.98
ATG4DQ86TL0 AC107083.1-201ENST00000439643 279 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 AL109933.2-201ENST00000452651 260 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 SNORA59A-201ENST00000459326 152 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 AP004217.1-201ENST00000480579 346 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 Y_RNA.659-201ENST00000515994 113 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.68□□□□□ -1.98
ATG4DQ86TL0 MIR3199-1-201ENST00000582434 88 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 MIR4762-201ENST00000585261 75 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.68□□□□□ -1.98
ATG4DQ86TL0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATG4DQ86TL0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATG4DQ86TL0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.68□□□□□ -1.98
ATG4DQ86TL0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.67□□□□□ -1.98
ATG4DQ86TL0 Y_RNA.95-201ENST00000363079 95 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms