Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC022306.3-201ENST00000619930 550 ntBASIC-1.97□□□□□ -2.72
VPS13CQ709C8 RNU6-926P-201ENST00000384075 107 ntBASIC-1.97□□□□□ -2.73
VPS13CQ709C8 RNU6-258P-201ENST00000390884 101 ntBASIC-1.97□□□□□ -2.73
VPS13CQ709C8 RNU4-22P-201ENST00000411058 166 ntBASIC-1.97□□□□□ -2.73
VPS13CQ709C8 PIGPP3-201ENST00000425307 415 ntBASIC-1.97□□□□□ -2.73
VPS13CQ709C8 MTCO1P31-201ENST00000506355 492 ntBASIC-1.97□□□□□ -2.73
VPS13CQ709C8 AC068339.1-201ENST00000526965 141 ntBASIC-1.97□□□□□ -2.73
VPS13CQ709C8 RNU6-323P-201ENST00000521915 107 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 Z94722.1-201ENST00000604328 474 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 DISC2.1-201ENST00000612827 205 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 SNORD115-15-201ENST00000364809 81 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 AL390729.2-201ENST00000416137 156 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 AC090844.1-201ENST00000422019 156 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.98□□□□□ -2.73
VPS13CQ709C8 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 SNORD115-16-201ENST00000363887 82 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 SNORD123-201ENST00000459473 70 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.98□□□□□ -2.73
VPS13CQ709C8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.98□□□□□ -2.73
VPS13CQ709C8 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 RNU6-746P-201ENST00000384112 109 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 RNU6-1245P-201ENST00000411130 106 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 MIR570-201ENST00000384917 97 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 AL138889.2-201ENST00000603883 242 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 RNU6-395P-201ENST00000365662 106 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 SNORA26.4-201ENST00000391188 123 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 AC108081.1-201ENST00000604358 221 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 AC093783.1-201ENST00000612976 329 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 AL138960.2-201ENST00000625145 535 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 U6.107-201ENST00000637108 79 ntBASIC-1.99□□□□□ -2.73
VPS13CQ709C8 Y_RNA.7-201ENST00000362352 102 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 AC090616.4-201ENST00000448026 115 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 NDUFA5P7-201ENST00000452914 242 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 AC005771.1-201ENST00000585581 349 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 Y_RNA.59-201ENST00000362828 102 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 RNU6-137P-201ENST00000363680 108 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 Y_RNA.222-201ENST00000364264 102 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 RNU6-865P-201ENST00000364772 107 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 MIR548H3-201ENST00000408771 118 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 Y_RNA.420-201ENST00000384043 110 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 RNA5SP201-201ENST00000410316 124 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2□□□□□ -2.73
VPS13CQ709C8 Y_RNA.781-201ENST00000620301 103 ntBASIC-2□□□□□ -2.73
VPS13CQ709C8 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 RNU6-855P-201ENST00000410395 104 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 RNU6-1190P-201ENST00000410811 104 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.01□□□□□ -2.73
VPS13CQ709C8 RNU6-1194P-201ENST00000516208 104 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 RNU6-1323P-201ENST00000384025 107 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 AC116353.2-201ENST00000505332 712 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-2.01□□□□□ -2.73
VPS13CQ709C8 TCL6_2.1-201ENST00000615162 119 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 RNU6-291P-201ENST00000384720 107 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-2.01□□□□□ -2.73
VPS13CQ709C8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-2.01□□□□□ -2.73
VPS13CQ709C8 MIR5693-201ENST00000577722 73 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 FTX_4.1-201ENST00000616291 147 ntBASIC-2.01□□□□□ -2.73
VPS13CQ709C8 Y_RNA.33-201ENST00000362591 102 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 Y_RNA.253-201ENST00000364562 112 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 RNU5E-6P-201ENST00000365574 115 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 MIR539-201ENST00000365690 78 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 AC019178.2-201ENST00000423595 505 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-2.02□□□□□ -2.73
VPS13CQ709C8 RNU4-55P-201ENST00000410731 137 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 RNU7-104P-201ENST00000459398 79 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 AC069113.1-201ENST00000517763 267 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 RNA5SP245-201ENST00000364239 121 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-2.02□□□□□ -2.73
VPS13CQ709C8 AC012531.4-201ENST00000616509 177 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 AL445523.1-201ENST00000451184 1362 ntBASIC-2.02□□□□□ -2.73
VPS13CQ709C8 MIR617-201ENST00000385030 97 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 MIR509-1-201ENST00000385265 94 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 MIR509-2-201ENST00000390724 91 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 AL008987.1-201ENST00000415528 237 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 RNU4-20P-201ENST00000365601 151 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.03□□□□□ -2.73
VPS13CQ709C8 Y_RNA.637-201ENST00000459424 114 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.03□□□□□ -2.73
VPS13CQ709C8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-2.03□□□□□ -2.73
VPS13CQ709C8 MIR4438-201ENST00000585271 93 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 AC022893.3-201ENST00000607665 437 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 AC145423.2-201ENST00000610631 239 ntBASIC-2.03□□□□□ -2.73
VPS13CQ709C8 SNORD38C-201ENST00000384381 69 ntBASIC-2.04□□□□□ -2.74
VPS13CQ709C8 MIR652-201ENST00000385278 98 ntBASIC-2.04□□□□□ -2.74
VPS13CQ709C8 SNORA49-201ENST00000386157 136 ntBASIC-2.04□□□□□ -2.74
VPS13CQ709C8 RNU6-341P-201ENST00000516973 96 ntBASIC-2.04□□□□□ -2.74
VPS13CQ709C8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-2.04□□□□□ -2.74
VPS13CQ709C8 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.04□□□□□ -2.74
VPS13CQ709C8 RNU5E-7P-201ENST00000365290 117 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms