Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 MRPS17P9-201ENST00000511924 393 ntBASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 AC090142.3-201ENST00000519012 385 ntBASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 AL049779.4-201ENST00000604500 156 ntBASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 SNORA28-201ENST00000606769 126 ntBASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 TUG1_4.1-201ENST00000619464 181 ntBASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 Y_RNA.91-201ENST00000363042 107 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 Y_RNA.251-201ENST00000364551 99 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 MIR539-201ENST00000365690 78 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 RNU6-588P-201ENST00000410281 105 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 RN7SKP223-201ENST00000410582 62 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 snoU13.23-201ENST00000458863 104 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 AC092991.1-201ENST00000477176 376 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 AC026436.1-201ENST00000510537 270 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 RNA5SP281-201ENST00000516504 135 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 MIR548AI-201ENST00000579940 88 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RUFY4Q6ZNE9 Y_RNA.66-201ENST00000362862 102 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 SNORA12.1-201ENST00000390873 148 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 SNORA48.1-201ENST00000390879 135 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 RNA5SP270-201ENST00000411361 118 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 HMGN2P3-201ENST00000433603 273 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 HMGN2P5-201ENST00000436882 273 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 RNU6-62P-201ENST00000516526 102 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 SNORA31.11-201ENST00000516528 139 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 AL365205.2-201ENST00000594586 68 ntBASIC2.66□□□□□ -1.98
RUFY4Q6ZNE9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RUFY4Q6ZNE9 SNORA63D-201ENST00000364359 132 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 Y_RNA.291-201ENST00000364886 113 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 RNU1-51P-201ENST00000365345 176 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 Y_RNA.420-201ENST00000384043 110 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 Y_RNA.542-201ENST00000384641 111 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 AC007064.1-201ENST00000412238 351 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 MTND4LP9-201ENST00000427694 174 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 MIR4446-201ENST00000578505 67 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 MIR5094-201ENST00000578766 85 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 U1.36-201ENST00000620684 176 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 MIR8054-201ENST00000620877 86 ntBASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RUFY4Q6ZNE9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 AC016717.2-201ENST00000609089 5141 ntBASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-1082P-201ENST00000364574 107 ntBASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 MIR597-201ENST00000384968 97 ntBASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-440P-201ENST00000390882 105 ntBASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 Y_RNA.584-201ENST00000391090 114 ntBASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 MLLT10P1-201ENST00000418346 262 ntBASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 AL606517.2-201ENST00000442855 241 ntBASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 MIR1291-201ENST00000627649 87 ntBASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
RUFY4Q6ZNE9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-888P-201ENST00000363010 101 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 SNORD68-201ENST00000363214 84 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 RNU1-52P-201ENST00000384190 164 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 RNA5SP109-201ENST00000391010 116 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 RN7SKP200-201ENST00000410564 320 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 AC108210.2-201ENST00000503681 201 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-479P-201ENST00000516348 105 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 AP001328.1-201ENST00000528550 176 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 AC131055.1-201ENST00000584626 316 ntBASIC2.63□□□□□ -1.99
RUFY4Q6ZNE9 SNORD14E-201ENST00000364009 85 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-442P-201ENST00000383968 104 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 MIR624-201ENST00000385217 97 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 MIR802-201ENST00000390235 94 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 SNORD72-201ENST00000390994 80 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 HMGN2P32-201ENST00000444648 269 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 AC015712.3-201ENST00000559380 164 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 SUB1P4-201ENST00000566062 339 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 AC006441.5-201ENST00000612680 209 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RUFY4Q6ZNE9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 Y_RNA.120-201ENST00000363304 110 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-22P-201ENST00000384355 107 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 MIR520A-201ENST00000384862 85 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-482P-201ENST00000391068 107 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 RNA5SP127-201ENST00000411051 133 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 SNRPGP13-201ENST00000442212 177 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms