Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RNU6-1211P-201ENST00000459179 105 ntBASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 AC011604.1-201ENST00000545978 196 ntBASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 MIR3646-201ENST00000578301 84 ntBASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 MIR4769-201ENST00000584126 77 ntBASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 MIR6079-201ENST00000635807 62 ntBASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 MIR6844-201ENST00000637122 62 ntBASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC62Q6P9F0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 Y_RNA.127-201ENST00000363386 109 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RNY1P11-201ENST00000363759 113 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 MIR597-201ENST00000384968 97 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RNU6-460P-201ENST00000391158 108 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 Y_RNA.629-201ENST00000411368 105 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RN7SKP101-201ENST00000411376 320 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RNU7-94P-201ENST00000459576 63 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RNU6-1333P-201ENST00000516162 93 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RNU6-1234P-201ENST00000516877 103 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RNU6-341P-201ENST00000516973 96 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 AL929325.1-201ENST00000603096 117 ntBASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC62Q6P9F0 RNU4-41P-201ENST00000364426 143 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 MIR539-201ENST00000365690 78 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 SNORD116-14-201ENST00000383894 92 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 SNORD116-17-201ENST00000383929 92 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 SNORA6-201ENST00000384033 151 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 SNORD116-15-201ENST00000384445 92 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 SNORD116-19-201ENST00000384729 92 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 MIR562-201ENST00000384894 95 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 RNU11-3P-201ENST00000391111 133 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 RNA5SP496-201ENST00000391240 109 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 RNU6-588P-201ENST00000410281 105 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 AL445646.1-201ENST00000431784 216 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 AL163195.1-201ENST00000496941 348 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 AL358944.1-201ENST00000528537 144 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 AC015712.3-201ENST00000559380 164 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 AC069114.2-201ENST00000604699 304 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 AL021707.8-201ENST00000609428 183 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 MIR6840-201ENST00000611937 71 ntBASIC2.42□□□□□ -2.02
CCDC62Q6P9F0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC62Q6P9F0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC62Q6P9F0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.41□□□□□ -2.02
CCDC62Q6P9F0 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
CCDC62Q6P9F0 SNORA48.3-201ENST00000391081 134 ntBASIC2.41□□□□□ -2.02
CCDC62Q6P9F0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.41□□□□□ -2.02
CCDC62Q6P9F0 TUG1_4.1-201ENST00000619464 181 ntBASIC2.41□□□□□ -2.02
CCDC62Q6P9F0 MIR6132-201ENST00000622083 109 ntBASIC2.41□□□□□ -2.02
CCDC62Q6P9F0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC62Q6P9F0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 SNORA75.5-201ENST00000391291 81 ntBASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 AL512604.1-201ENST00000404812 257 ntBASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 CYCSP49-201ENST00000420810 319 ntBASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 DEFB122-202ENST00000569013 197 ntBASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 MIR2681-201ENST00000581814 105 ntBASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 AC078899.2-201ENST00000595282 212 ntBASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 AL049861.1-201ENST00000603130 150 ntBASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC62Q6P9F0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 Y_RNA.251-201ENST00000364551 99 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 RNU6-1082P-201ENST00000364574 107 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 SNORA79-201ENST00000408376 140 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 MIR378D2-201ENST00000580636 98 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 AL359881.1-201ENST00000602916 267 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 AC120024.3-201ENST00000603167 156 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 AC011603.4-201ENST00000611325 277 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 AP001340.1-201ENST00000624405 217 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 AC245060.5-201ENST00000610778 3293 ntBASIC2.39□□□□□ -2.03
CCDC62Q6P9F0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 Y_RNA.273-201ENST00000364703 102 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 Y_RNA.353-201ENST00000365440 108 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 RNU6-597P-201ENST00000365620 102 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 RNU6-484P-201ENST00000384016 107 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 RNU6-80P-201ENST00000384195 107 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 SNORD20-201ENST00000384550 80 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 SNORA48.1-201ENST00000390879 135 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 ZNF355P-201ENST00000427301 3216 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 RNU6-197P-201ENST00000516680 100 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 RNU2-56P-201ENST00000516826 190 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 SNORA31.25-201ENST00000517242 134 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 MIR5094-201ENST00000578766 85 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 AC022217.4-201ENST00000604389 163 ntBASIC2.38□□□□□ -2.03
CCDC62Q6P9F0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC62Q6P9F0 AL596028.1-201ENST00000326971 197 ntBASIC2.37□□□□□ -2.03
CCDC62Q6P9F0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.37□□□□□ -2.03
CCDC62Q6P9F0 RNU6-1336P-201ENST00000383886 109 ntBASIC2.37□□□□□ -2.03
CCDC62Q6P9F0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.37□□□□□ -2.03
CCDC62Q6P9F0 RNU2-55P-201ENST00000411146 174 ntBASIC2.37□□□□□ -2.03
CCDC62Q6P9F0 AC245047.4-201ENST00000433189 144 ntBASIC2.37□□□□□ -2.03
CCDC62Q6P9F0 AC069257.2-201ENST00000441819 155 ntBASIC2.37□□□□□ -2.03
CCDC62Q6P9F0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 216.6 ms