Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC134878.1-201ENST00000619901 243 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 AC095038.3-201ENST00000634439 195 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
COL13A1Q5TAT6 MIR450A1-201ENST00000362262 91 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 Y_RNA.85-201ENST00000363014 111 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 RNY1P10-201ENST00000363268 113 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 RNU6-1107P-201ENST00000364817 104 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 MIR518F-201ENST00000384973 87 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 RNA5SP323-201ENST00000391094 133 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 Y_RNA.677-201ENST00000516401 85 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 AC106754.2-201ENST00000623006 233 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 U6.108-201ENST00000637764 58 ntBASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL13A1Q5TAT6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
COL13A1Q5TAT6 Y_RNA.369-201ENST00000365568 117 ntBASIC3.14□□□□□ -1.91
COL13A1Q5TAT6 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
COL13A1Q5TAT6 ATP5J2P3-201ENST00000451550 258 ntBASIC3.14□□□□□ -1.91
COL13A1Q5TAT6 RPS27P29-201ENST00000463110 252 ntBASIC3.14□□□□□ -1.91
COL13A1Q5TAT6 AC006441.5-201ENST00000612680 209 ntBASIC3.14□□□□□ -1.91
COL13A1Q5TAT6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
COL13A1Q5TAT6 RNU6-442P-201ENST00000383968 104 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 RNU6-160P-201ENST00000384591 107 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 SNORD12C-201ENST00000386307 89 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 CST2P1-201ENST00000425770 87 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 AC099677.2-201ENST00000436385 175 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 AC018868.1-201ENST00000491307 315 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 RNU6-537P-201ENST00000517277 103 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 AC007536.1-201ENST00000533382 349 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 MIR4762-201ENST00000585261 75 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 AC002984.1-201ENST00000591692 448 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 AC022217.4-201ENST00000604389 163 ntBASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL13A1Q5TAT6 SNORA1B-201ENST00000362535 133 ntBASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 Y_RNA.49-201ENST00000362714 112 ntBASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 U8.5-201ENST00000364528 136 ntBASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 SNORA8-201ENST00000384574 139 ntBASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 TRMT112P2-201ENST00000512910 132 ntBASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 MIR2276-201ENST00000516886 89 ntBASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 MIR5582-201ENST00000579697 68 ntBASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 MAPK10-266ENST00000641066 6555 ntBASIC3.12□□□□□ -1.91
COL13A1Q5TAT6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 MIR30E-201ENST00000362104 92 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 RNU6-766P-201ENST00000362478 107 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 SNORD14E-201ENST00000364009 85 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 SNORA25B-201ENST00000365507 128 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 Y_RNA.366-201ENST00000365540 102 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 RNU6-1189P-201ENST00000383958 107 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 AL117342.1-201ENST00000404861 406 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 MIR1302-5-201ENST00000408164 150 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 RNU6-554P-201ENST00000410466 106 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 AC004486.1-201ENST00000546846 233 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 AL449363.1-201ENST00000617815 186 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 AC073476.4-201ENST00000628409 72 ntBASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
COL13A1Q5TAT6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 Y_RNA.198-201ENST00000364013 98 ntBASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 RNU6-220P-201ENST00000390919 107 ntBASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 MIR548O-201ENST00000408583 114 ntBASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL13A1Q5TAT6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 RNY4P6-201ENST00000363667 96 ntBASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 RNU6-1113P-201ENST00000384348 107 ntBASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 MIR759-201ENST00000390224 91 ntBASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 RNU6-295P-201ENST00000516901 104 ntBASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 AC009831.4-201ENST00000620744 325 ntBASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
COL13A1Q5TAT6 AL589743.1-201ENST00000551932 2712 ntBASIC3.09□□□□□ -1.92
COL13A1Q5TAT6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
COL13A1Q5TAT6 Y_RNA.163-201ENST00000363702 113 ntBASIC3.08□□□□□ -1.92
COL13A1Q5TAT6 Y_RNA.213-201ENST00000364178 111 ntBASIC3.08□□□□□ -1.92
COL13A1Q5TAT6 snoU2-30.1-201ENST00000365012 70 ntBASIC3.08□□□□□ -1.92
COL13A1Q5TAT6 Y_RNA.336-201ENST00000365307 109 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms