Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN1Q16799 AL049873.1-201ENST00000480540 376 ntBASIC3.18□□□□□ -1.9
RTN1Q16799 RN7SL297P-201ENST00000483161 293 ntBASIC3.18□□□□□ -1.9
RTN1Q16799 SNORD45.4-201ENST00000516629 73 ntBASIC3.18□□□□□ -1.9
RTN1Q16799 U4atac.1-201ENST00000618345 95 ntBASIC3.18□□□□□ -1.9
RTN1Q16799 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.18□□□□□ -1.9
RTN1Q16799 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTN1Q16799 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN1Q16799 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTN1Q16799 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RTN1Q16799 Y_RNA.37-201ENST00000362606 108 ntBASIC3.17□□□□□ -1.9
RTN1Q16799 Y_RNA.547-201ENST00000384654 119 ntBASIC3.17□□□□□ -1.9
RTN1Q16799 RNA5SP21-201ENST00000410917 96 ntBASIC3.17□□□□□ -1.9
RTN1Q16799 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN1Q16799 AL445646.1-201ENST00000431784 216 ntBASIC3.17□□□□□ -1.9
RTN1Q16799 RPL39P34-201ENST00000477141 156 ntBASIC3.17□□□□□ -1.9
RTN1Q16799 RN7SKP132-201ENST00000516001 208 ntBASIC3.17□□□□□ -1.9
RTN1Q16799 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RTN1Q16799 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.16□□□□□ -1.9
RTN1Q16799 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RTN1Q16799 RNA5SP482-201ENST00000391269 118 ntBASIC3.16□□□□□ -1.9
RTN1Q16799 AL445687.1-201ENST00000439946 251 ntBASIC3.16□□□□□ -1.9
RTN1Q16799 AL109933.2-201ENST00000452651 260 ntBASIC3.16□□□□□ -1.9
RTN1Q16799 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
RTN1Q16799 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
RTN1Q16799 ZNF720P1-201ENST00000562403 1939 ntBASIC3.16□□□□□ -1.9
RTN1Q16799 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RTN1Q16799 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.15□□□□□ -1.9
RTN1Q16799 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RTN1Q16799 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
RTN1Q16799 SNORD115-3-201ENST00000363100 82 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 SNORA80A-201ENST00000363922 136 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 Y_RNA.198-201ENST00000364013 98 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 Y_RNA.213-201ENST00000364178 111 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 Y_RNA.336-201ENST00000365307 109 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 RNU6-1014P-201ENST00000383940 103 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 Y_RNA.558-201ENST00000384685 113 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 SNORA80E-201ENST00000384744 137 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 MIR590-201ENST00000385008 97 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 MIR1302-5-201ENST00000408164 150 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 SNORD88.1-201ENST00000408684 91 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 SNORA11.4-201ENST00000408823 129 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.15□□□□□ -1.91
RTN1Q16799 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN1Q16799 AC099677.2-201ENST00000436385 175 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 RNY4P20-201ENST00000516678 93 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 SNORD36C-201ENST00000516733 66 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 MIR3169-201ENST00000578032 83 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 ELOCP29-201ENST00000588193 334 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 AL449363.1-201ENST00000617815 186 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 AC015726.2-201ENST00000620112 122 ntBASIC3.15□□□□□ -1.91
RTN1Q16799 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTN1Q16799 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTN1Q16799 AL589743.1-201ENST00000551932 2712 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 MIR759-201ENST00000390224 91 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 RNU6-1275P-201ENST00000391087 107 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.14□□□□□ -1.91
RTN1Q16799 SNRPGP14-201ENST00000435400 219 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 AL606517.2-201ENST00000442855 241 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 RNU7-28P-201ENST00000516759 62 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 GTF3AP2-201ENST00000557014 266 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 AC026271.5-201ENST00000577873 130 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 AC021443.1-201ENST00000604478 211 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 MIR7106-201ENST00000612419 65 ntBASIC3.14□□□□□ -1.91
RTN1Q16799 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTN1Q16799 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTN1Q16799 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.13□□□□□ -1.91
RTN1Q16799 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.13□□□□□ -1.91
RTN1Q16799 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTN1Q16799 Y_RNA.49-201ENST00000362714 112 ntBASIC3.13□□□□□ -1.91
RTN1Q16799 RNU1-133P-201ENST00000364867 167 ntBASIC3.13□□□□□ -1.91
RTN1Q16799 MIR9-1-201ENST00000385198 89 ntBASIC3.13□□□□□ -1.91
RTN1Q16799 SNORA40.13-201ENST00000516379 120 ntBASIC3.13□□□□□ -1.91
RTN1Q16799 SNORA18.7-201ENST00000516910 131 ntBASIC3.13□□□□□ -1.91
RTN1Q16799 AP003327.1-201ENST00000529684 127 ntBASIC3.13□□□□□ -1.91
RTN1Q16799 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.13□□□□□ -1.91
RTN1Q16799 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RTN1Q16799 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTN1Q16799 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.12□□□□□ -1.91
RTN1Q16799 RNY4P6-201ENST00000363667 96 ntBASIC3.12□□□□□ -1.91
RTN1Q16799 RNU6-414P-201ENST00000363705 104 ntBASIC3.12□□□□□ -1.91
RTN1Q16799 RNY1P6-201ENST00000384193 109 ntBASIC3.12□□□□□ -1.91
RTN1Q16799 MT-TI-201ENST00000387365 69 ntBASIC3.12□□□□□ -1.91
RTN1Q16799 RNA5SP109-201ENST00000391010 116 ntBASIC3.12□□□□□ -1.91
RTN1Q16799 U8.17-201ENST00000391292 132 ntBASIC3.12□□□□□ -1.91
RTN1Q16799 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.12□□□□□ -1.91
RTN1Q16799 AP003484.1-201ENST00000530974 250 ntBASIC3.12□□□□□ -1.91
RTN1Q16799 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.12□□□□□ -1.91
RTN1Q16799 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN1Q16799 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTN1Q16799 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTN1Q16799 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
RTN1Q16799 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTN1Q16799 MIR494-201ENST00000349529 81 ntBASIC3.11□□□□□ -1.91
RTN1Q16799 RNU6-349P-201ENST00000362402 107 ntBASIC3.11□□□□□ -1.91
RTN1Q16799 Y_RNA.440-201ENST00000384120 114 ntBASIC3.11□□□□□ -1.91
RTN1Q16799 NDUFB4P4-201ENST00000404822 243 ntBASIC3.11□□□□□ -1.91
RTN1Q16799 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.11□□□□□ -1.91
RTN1Q16799 STAG3L5P-204ENST00000443759 179 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms