Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNY4P20-201ENST00000516678 93 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 RNU6-537P-201ENST00000517277 103 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 AP003484.1-201ENST00000530974 250 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 MIR4298-201ENST00000584380 73 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 AC009831.4-201ENST00000620744 325 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 MIR8054-201ENST00000620877 86 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 AC106754.2-201ENST00000623006 233 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDH1Q08174 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PCDH1Q08174 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PCDH1Q08174 MIR422A-201ENST00000362286 90 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 RNU1-58P-201ENST00000362413 163 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 Y_RNA.213-201ENST00000364178 111 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 RNU1-133P-201ENST00000364867 167 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 RNY1P6-201ENST00000384193 109 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 MIR29C-201ENST00000385231 88 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 RNU6-440P-201ENST00000390882 105 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 AL590004.2-201ENST00000404787 371 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDH1Q08174 SNORA18.7-201ENST00000516910 131 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 AC021443.1-201ENST00000604478 211 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 AL162274.2-201ENST00000614406 332 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 AL035470.1-201ENST00000622571 220 ntBASIC2.84□□□□□ -1.95
PCDH1Q08174 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
PCDH1Q08174 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.84□□□□□ -1.96
PCDH1Q08174 AC009487.2-201ENST00000420969 6821 ntBASIC2.83□□□□□ -1.96
PCDH1Q08174 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDH1Q08174 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PCDH1Q08174 Y_RNA.163-201ENST00000363702 113 ntBASIC2.83□□□□□ -1.96
PCDH1Q08174 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDH1Q08174 AC114811.1-201ENST00000507207 168 ntBASIC2.83□□□□□ -1.96
PCDH1Q08174 MIR5582-201ENST00000579697 68 ntBASIC2.83□□□□□ -1.96
PCDH1Q08174 AC069114.2-201ENST00000604699 304 ntBASIC2.83□□□□□ -1.96
PCDH1Q08174 SNORA28-201ENST00000606769 126 ntBASIC2.83□□□□□ -1.96
PCDH1Q08174 AC022202.1-201ENST00000613515 211 ntBASIC2.83□□□□□ -1.96
PCDH1Q08174 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDH1Q08174 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDH1Q08174 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDH1Q08174 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PCDH1Q08174 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
PCDH1Q08174 AL589743.1-201ENST00000551932 2712 ntBASIC2.83□□□□□ -1.96
PCDH1Q08174 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH1Q08174 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH1Q08174 Y_RNA.49-201ENST00000362714 112 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 SNORA63.5-201ENST00000363548 123 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 RNY4P6-201ENST00000363667 96 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 RNU6-1019P-201ENST00000364424 107 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 SNORA9.2-201ENST00000365361 133 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 SNORD38C-201ENST00000384381 69 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 MIR181B1-201ENST00000385240 110 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 MIR759-201ENST00000390224 91 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 MIR1302-5-201ENST00000408164 150 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDH1Q08174 RNU7-80P-201ENST00000459562 61 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDH1Q08174 AC084364.2-201ENST00000546924 395 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH1Q08174 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
PCDH1Q08174 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDH1Q08174 RNU6-766P-201ENST00000362478 107 ntBASIC2.81□□□□□ -1.96
PCDH1Q08174 Y_RNA.351-201ENST00000365436 96 ntBASIC2.81□□□□□ -1.96
PCDH1Q08174 RNU6-756P-201ENST00000383997 107 ntBASIC2.81□□□□□ -1.96
PCDH1Q08174 RNU6-163P-201ENST00000384396 106 ntBASIC2.81□□□□□ -1.96
PCDH1Q08174 U8.17-201ENST00000391292 132 ntBASIC2.81□□□□□ -1.96
PCDH1Q08174 RNA5SP341-201ENST00000516261 117 ntBASIC2.81□□□□□ -1.96
PCDH1Q08174 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCDH1Q08174 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDH1Q08174 RNU1-91P-201ENST00000364746 163 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 Y_RNA.298-201ENST00000364960 107 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 Y_RNA.323-201ENST00000365157 109 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 Y_RNA.328-201ENST00000365208 113 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 Y_RNA.362-201ENST00000365518 110 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 RNU6-1014P-201ENST00000383940 103 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 Y_RNA.454-201ENST00000384224 113 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 UBBP3-201ENST00000445497 241 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 SNORA72.7-201ENST00000516349 94 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 RNU6-1116P-201ENST00000517269 99 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 SUMO2P16-201ENST00000519475 264 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 AC002984.1-201ENST00000591692 448 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 RNU6-94P-201ENST00000607728 107 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 MIR6852-201ENST00000621699 66 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 AC006386.2-201ENST00000624491 75 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 AC012005.1-201ENST00000624575 75 ntBASIC2.8□□□□□ -1.96
PCDH1Q08174 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCDH1Q08174 MIRLET7C-201ENST00000362160 84 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 RNU6-414P-201ENST00000363705 104 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 SNORA51.5-201ENST00000384126 131 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 AL627390.1-201ENST00000396055 340 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 BX510359.4-201ENST00000423750 193 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 AC022018.1-201ENST00000430685 241 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDH1Q08174 RNU7-164P-201ENST00000459221 62 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 RPL39P34-201ENST00000477141 156 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 RPL23AP94-201ENST00000512518 302 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 SNORA31.10-201ENST00000516482 106 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PCDH1Q08174 MIR3126-201ENST00000577443 74 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 MIR4513-201ENST00000581077 86 ntBASIC2.79□□□□□ -1.96
PCDH1Q08174 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms