Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC011458.1-201ENST00000604034 617 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.86□□□□□ -2.55
PRKDCP78527 RNU6-329P-201ENST00000459618 107 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 RNU6-777P-201ENST00000364265 104 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 RNU6-855P-201ENST00000410395 104 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 RNU4-55P-201ENST00000410731 137 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 AL008987.1-201ENST00000415528 237 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 AL049829.1-201ENST00000465411 156 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 AC022784.5-201ENST00000522241 437 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 POLR3GP1-201ENST00000594073 261 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 AC002044.1-201ENST00000606707 158 ntBASIC-0.86□□□□□ -2.55
PRKDCP78527 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 SNORD38B-201ENST00000384690 67 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 MIR181B2-201ENST00000385004 89 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 AC022028.1-201ENST00000412054 408 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.87□□□□□ -2.55
PRKDCP78527 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.87□□□□□ -2.55
PRKDCP78527 MTND1P24-201ENST00000552175 861 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 Z94722.1-201ENST00000604328 474 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 RNU6-769P-201ENST00000384407 104 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 RNU6-455P-201ENST00000384681 107 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 SNORD65B-201ENST00000459126 73 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 SNORD38.3-201ENST00000516599 73 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 AC100767.1-201ENST00000528178 123 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.87□□□□□ -2.55
PRKDCP78527 RNU4-1-201ENST00000363925 141 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 MIR517B-201ENST00000385102 67 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 SNORD64-201ENST00000386683 67 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 AL137792.2-201ENST00000443484 235 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 snoU13.13-201ENST00000458842 104 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 DEFB131E-201ENST00000532329 154 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 MIR6854-201ENST00000614935 69 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 RNU6-228P-201ENST00000362700 106 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 RNU6-371P-201ENST00000364283 108 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 RNU6-609P-201ENST00000365459 107 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 SNORD24-201ENST00000383884 75 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 MTCO2P29-201ENST00000465212 189 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.87□□□□□ -2.55
PRKDCP78527 AC022418.1-201ENST00000624118 445 ntBASIC-0.87□□□□□ -2.55
PRKDCP78527 MIR558-201ENST00000384920 94 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 RPL30P16-201ENST00000419341 429 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.88□□□□□ -2.55
PRKDCP78527 MIR3139-201ENST00000579145 76 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 AC008873.1-201ENST00000625051 138 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 MIR518B-201ENST00000385127 83 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 AC023510.2-201ENST00000622162 746 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 SNORA27.1-201ENST00000362604 124 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 RNU6-553P-201ENST00000364047 96 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 SNORD77.3-201ENST00000391113 65 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 SNRPGP10-201ENST00000432323 225 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 AL445193.1-201ENST00000441183 141 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.88□□□□□ -2.55
PRKDCP78527 RNU7-181P-201ENST00000517234 74 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 MTND5P34-201ENST00000568888 325 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 AL450270.1-201ENST00000606160 391 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 AC011373.1-201ENST00000607270 237 ntBASIC-0.88□□□□□ -2.55
PRKDCP78527 RNY1P12-201ENST00000364251 105 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RNA5SP494-201ENST00000410653 129 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RNU4-83P-201ENST00000410863 133 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 MRPS10P1-201ENST00000448483 130 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RPL39P5-202ENST00000512505 151 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RNU6-201P-201ENST00000517100 61 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 AL121655.1-201ENST00000605811 308 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 AC026741.1-201ENST00000605892 482 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 AC073648.5-201ENST00000603502 305 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 MIR6502-201ENST00000617296 76 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RNU6-740P-201ENST00000364734 105 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RNU4-66P-201ENST00000365199 138 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 SNORA20.2-201ENST00000383922 131 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 SNORA24-201ENST00000384096 131 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 SNORA72-201ENST00000384339 132 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.89□□□□□ -2.55
PRKDCP78527 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.89□□□□□ -2.55
PRKDCP78527 AL117351.1-201ENST00000438864 766 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RPL7P42-201ENST00000481005 679 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RNU6-612P-201ENST00000516909 102 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 AL442663.2-201ENST00000554385 511 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 RNU6-85P-201ENST00000605989 107 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 MIR6082-201ENST00000613604 109 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 AC068880.4-201ENST00000623082 495 ntBASIC-0.89□□□□□ -2.55
PRKDCP78527 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 SNORD18.1-201ENST00000363807 70 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.9□□□□□ -2.55
PRKDCP78527 RPL30P10-201ENST00000488148 337 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 MIR3941-201ENST00000582572 103 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 MIR6507-201ENST00000613630 70 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 USMG5P1-201ENST00000425964 177 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.9□□□□□ -2.55
PRKDCP78527 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms