Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 Y_RNA.700-201ENST00000516806 100 ntBASIC2.01□□□□□ -2.09
EIF4A1P60842 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.01□□□□□ -2.09
EIF4A1P60842 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
EIF4A1P60842 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.01□□□□□ -2.09
EIF4A1P60842 MIR4724-201ENST00000579485 89 ntBASIC2.01□□□□□ -2.09
EIF4A1P60842 Z83818.1-201ENST00000603584 150 ntBASIC2.01□□□□□ -2.09
EIF4A1P60842 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.01□□□□□ -2.09
EIF4A1P60842 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.01□□□□□ -2.09
EIF4A1P60842 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
EIF4A1P60842 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
EIF4A1P60842 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
EIF4A1P60842 Y_RNA.24-201ENST00000362508 103 ntBASIC2□□□□□ -2.09
EIF4A1P60842 RNU6-674P-201ENST00000363831 107 ntBASIC2□□□□□ -2.09
EIF4A1P60842 Y_RNA.203-201ENST00000364106 102 ntBASIC2□□□□□ -2.09
EIF4A1P60842 RNU4-17P-201ENST00000365598 141 ntBASIC2□□□□□ -2.09
EIF4A1P60842 Y_RNA.785-201ENST00000384290 109 ntBASIC2□□□□□ -2.09
EIF4A1P60842 Y_RNA.644-201ENST00000459006 113 ntBASIC2□□□□□ -2.09
EIF4A1P60842 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2□□□□□ -2.09
EIF4A1P60842 AC108729.3-201ENST00000513484 108 ntBASIC2□□□□□ -2.09
EIF4A1P60842 Y_RNA.674-201ENST00000516362 113 ntBASIC2□□□□□ -2.09
EIF4A1P60842 RNA5SP437-201ENST00000517249 129 ntBASIC2□□□□□ -2.09
EIF4A1P60842 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
EIF4A1P60842 AP002004.2-201ENST00000531656 154 ntBASIC2□□□□□ -2.09
EIF4A1P60842 DNAJC19P9-201ENST00000555084 351 ntBASIC2□□□□□ -2.09
EIF4A1P60842 MIR4308-201ENST00000580634 81 ntBASIC2□□□□□ -2.09
EIF4A1P60842 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
EIF4A1P60842 RNU6-47P-201ENST00000383866 107 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 RNU6-969P-201ENST00000383900 105 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 RNU6-296P-201ENST00000384608 107 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 MIR520A-201ENST00000384862 85 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 MIR1278-201ENST00000408753 81 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 RNA5SP100-201ENST00000410903 110 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 RNA5SP59-201ENST00000410922 110 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 COX6CP10-201ENST00000416832 224 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 AL138752.1-201ENST00000452964 351 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 RNU6-1053P-201ENST00000515930 101 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 SNORA81.3-201ENST00000517283 198 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 AL358944.1-201ENST00000528537 144 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 SNORD53B-201ENST00000577887 78 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 BX248123.2-201ENST00000606318 124 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.99□□□□□ -2.09
EIF4A1P60842 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.99□□□□□ -2.09
EIF4A1P60842 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
EIF4A1P60842 Y_RNA.29-201ENST00000362570 113 ntBASIC1.98□□□□□ -2.09
EIF4A1P60842 RNU6-1020P-201ENST00000363684 107 ntBASIC1.98□□□□□ -2.09
EIF4A1P60842 SNORA4.2-201ENST00000365313 147 ntBASIC1.98□□□□□ -2.09
EIF4A1P60842 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
EIF4A1P60842 RNU6-381P-201ENST00000391259 108 ntBASIC1.98□□□□□ -2.09
EIF4A1P60842 Y_RNA.793-201ENST00000411222 111 ntBASIC1.98□□□□□ -2.09
EIF4A1P60842 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.98□□□□□ -2.09
EIF4A1P60842 RNU2-56P-201ENST00000516826 190 ntBASIC1.98□□□□□ -2.09
EIF4A1P60842 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.98□□□□□ -2.09
EIF4A1P60842 MIR5688-201ENST00000580619 83 ntBASIC1.98□□□□□ -2.09
EIF4A1P60842 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.98□□□□□ -2.09
EIF4A1P60842 MIR8054-201ENST00000620877 86 ntBASIC1.98□□□□□ -2.09
EIF4A1P60842 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
EIF4A1P60842 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
EIF4A1P60842 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
EIF4A1P60842 Y_RNA.164-201ENST00000363709 102 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 snoU2_19.4-201ENST00000364329 80 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 RNU4-41P-201ENST00000364426 143 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
EIF4A1P60842 RNU6-918P-201ENST00000391219 106 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 RNU2-7P-201ENST00000410794 178 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 RNU2-64P-201ENST00000411315 191 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.97□□□□□ -2.09
EIF4A1P60842 HSPE1P9-201ENST00000440046 311 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 AL049830.1-201ENST00000468034 425 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 SNORA31.10-201ENST00000516482 106 ntBASIC1.97□□□□□ -2.09
EIF4A1P60842 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.97□□□□□ -2.09
EIF4A1P60842 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
EIF4A1P60842 Y_RNA.229-201ENST00000364347 113 ntBASIC1.96□□□□□ -2.1
EIF4A1P60842 Y_RNA.253-201ENST00000364562 112 ntBASIC1.96□□□□□ -2.1
EIF4A1P60842 MIR517C-201ENST00000385103 95 ntBASIC1.96□□□□□ -2.1
EIF4A1P60842 RNU6-440P-201ENST00000390882 105 ntBASIC1.96□□□□□ -2.1
EIF4A1P60842 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF4A1P60842 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF4A1P60842 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.96□□□□□ -2.1
EIF4A1P60842 AP002392.1-201ENST00000537692 208 ntBASIC1.96□□□□□ -2.1
EIF4A1P60842 AC004792.1-201ENST00000614523 137 ntBASIC1.96□□□□□ -2.1
EIF4A1P60842 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
EIF4A1P60842 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
EIF4A1P60842 RNU6-1209P-201ENST00000363655 107 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 Y_RNA.796-201ENST00000364268 102 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 Y_RNA.799-201ENST00000364992 102 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 SNORA67.6-201ENST00000391093 99 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 AC245047.8-201ENST00000456455 284 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 HMGN1P7-201ENST00000491722 313 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 SCARNA8-201ENST00000515924 131 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 RN7SKP164-201ENST00000516138 266 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 SNORA31.17-201ENST00000516953 127 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 RNU6-182P-201ENST00000516970 105 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 AC022559.1-201ENST00000520905 205 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 RPL23AP91-201ENST00000569211 455 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 AL512598.1-201ENST00000610158 273 ntBASIC1.95□□□□□ -2.1
EIF4A1P60842 AL591926.4-201ENST00000616895 298 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms