Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 AC009237.6-201ENST00000446969 424 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 RNU7-94P-201ENST00000459576 63 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 AC008413.1-201ENST00000511864 177 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.52□□□□□ -2.01
ITGA1P56199 Y_RNA.666-201ENST00000516187 112 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 AP002004.2-201ENST00000531656 154 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 MIR4635-201ENST00000583759 79 ntBASIC2.52□□□□□ -2.01
ITGA1P56199 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ITGA1P56199 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
ITGA1P56199 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ITGA1P56199 SNORA1B-201ENST00000362535 133 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 SNORD116-21-201ENST00000384507 92 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 MIRLET7F2-201ENST00000385277 83 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 MIR1262-201ENST00000408276 93 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 AC063976.4-201ENST00000421971 163 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 CST2P1-201ENST00000425770 87 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 SNRPGP13-201ENST00000442212 177 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 AL049830.1-201ENST00000468034 425 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 RN7SKP19-201ENST00000516016 252 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 RNA5SP236-201ENST00000516169 116 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 RNA5SP282-201ENST00000516355 108 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 RNA5SP148-201ENST00000516527 94 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 AC024995.1-201ENST00000523014 93 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 AC022217.4-201ENST00000604389 163 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 AL121890.5-201ENST00000620848 304 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 MTND5P32-201ENST00000560711 1802 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ITGA1P56199 AC007336.1-201ENST00000576365 3828 ntBASIC2.51□□□□□ -2.01
ITGA1P56199 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
ITGA1P56199 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ITGA1P56199 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ITGA1P56199 Y_RNA.346-201ENST00000365385 112 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 MIR548A2-201ENST00000384956 97 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 MIR522-201ENST00000385071 87 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 FTH1P12-201ENST00000432137 551 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 AC104389.3-201ENST00000445629 235 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 AL021397.1-201ENST00000451806 248 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.5□□□□□ -2.01
ITGA1P56199 RNU6-693P-201ENST00000516134 107 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 RNU1-41P-201ENST00000516161 162 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 RNU1-48P-201ENST00000516400 162 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 U4atac.1-201ENST00000618345 95 ntBASIC2.5□□□□□ -2.01
ITGA1P56199 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
ITGA1P56199 RNU6-1164P-201ENST00000364428 107 ntBASIC2.49□□□□□ -2.01
ITGA1P56199 MIR802-201ENST00000390235 94 ntBASIC2.49□□□□□ -2.01
ITGA1P56199 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
ITGA1P56199 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.49□□□□□ -2.01
ITGA1P56199 UBL5P3-201ENST00000475112 231 ntBASIC2.49□□□□□ -2.01
ITGA1P56199 AL163195.1-201ENST00000496941 348 ntBASIC2.49□□□□□ -2.01
ITGA1P56199 AC025166.1-201ENST00000612411 163 ntBASIC2.49□□□□□ -2.01
ITGA1P56199 AC064859.1-201ENST00000624741 174 ntBASIC2.49□□□□□ -2.01
ITGA1P56199 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.49□□□□□ -2.01
ITGA1P56199 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
ITGA1P56199 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.49□□□□□ -2.01
ITGA1P56199 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
ITGA1P56199 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
ITGA1P56199 Y_RNA.35-201ENST00000362601 101 ntBASIC2.48□□□□□ -2.01
ITGA1P56199 MIR518F-201ENST00000384973 87 ntBASIC2.48□□□□□ -2.01
ITGA1P56199 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ITGA1P56199 SNORD77.3-201ENST00000391113 65 ntBASIC2.48□□□□□ -2.01
ITGA1P56199 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.48□□□□□ -2.01
ITGA1P56199 RNA5SP24-201ENST00000516478 95 ntBASIC2.48□□□□□ -2.01
ITGA1P56199 RNU6-1149P-201ENST00000516810 97 ntBASIC2.48□□□□□ -2.01
ITGA1P56199 SNORD53-201ENST00000579969 78 ntBASIC2.48□□□□□ -2.01
ITGA1P56199 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
ITGA1P56199 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.48□□□□□ -2.01
ITGA1P56199 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
ITGA1P56199 RNU6-862P-201ENST00000362804 105 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 RNA5SP493-201ENST00000364115 91 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 RNU6-880P-201ENST00000384526 107 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 SNORA67.4-201ENST00000384688 142 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
ITGA1P56199 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.47□□□□□ -2.01
ITGA1P56199 Y_RNA.649-201ENST00000459077 103 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 IGKV1-22-201ENST00000524313 326 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 MIR3613-201ENST00000579844 87 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 AL449363.1-201ENST00000617815 186 ntBASIC2.47□□□□□ -2.01
ITGA1P56199 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.47□□□□□ -2.01
ITGA1P56199 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
ITGA1P56199 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.46□□□□□ -2.01
ITGA1P56199 SNORD68-201ENST00000363214 84 ntBASIC2.46□□□□□ -2.02
ITGA1P56199 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.46□□□□□ -2.02
ITGA1P56199 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.46□□□□□ -2.02
ITGA1P56199 RNU6-113P-201ENST00000516653 101 ntBASIC2.46□□□□□ -2.02
ITGA1P56199 SCARNA15-202ENST00000516881 127 ntBASIC2.46□□□□□ -2.02
ITGA1P56199 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ITGA1P56199 MTND5P18-201ENST00000445624 1801 ntBASIC2.46□□□□□ -2.02
ITGA1P56199 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ITGA1P56199 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
ITGA1P56199 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ITGA1P56199 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.45□□□□□ -2.02
ITGA1P56199 RNU6-147P-201ENST00000383983 107 ntBASIC2.45□□□□□ -2.02
ITGA1P56199 MIR548A1-201ENST00000385041 97 ntBASIC2.45□□□□□ -2.02
ITGA1P56199 RNU6-237P-201ENST00000515985 71 ntBASIC2.45□□□□□ -2.02
ITGA1P56199 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
ITGA1P56199 MIR3169-201ENST00000578032 83 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms