Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 RNU7-172P-201ENST00000517125 64 ntBASIC1.98□□□□□ -2.09
TTC3P53804 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.98□□□□□ -2.09
TTC3P53804 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.98□□□□□ -2.09
TTC3P53804 U6.73-201ENST00000619194 103 ntBASIC1.98□□□□□ -2.09
TTC3P53804 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
TTC3P53804 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TTC3P53804 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TTC3P53804 Y_RNA.587-201ENST00000391210 103 ntBASIC1.98□□□□□ -2.09
TTC3P53804 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.98□□□□□ -2.09
TTC3P53804 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.98□□□□□ -2.09
TTC3P53804 RNU6-126P-201ENST00000516685 103 ntBASIC1.98□□□□□ -2.09
TTC3P53804 MIR548X2-201ENST00000579776 100 ntBASIC1.98□□□□□ -2.09
TTC3P53804 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
TTC3P53804 Y_RNA.66-201ENST00000362862 102 ntBASIC1.97□□□□□ -2.09
TTC3P53804 AL627390.1-201ENST00000396055 340 ntBASIC1.97□□□□□ -2.09
TTC3P53804 RNA5SP270-201ENST00000411361 118 ntBASIC1.97□□□□□ -2.09
TTC3P53804 AC008267.6-201ENST00000441664 139 ntBASIC1.97□□□□□ -2.09
TTC3P53804 AL121914.1-201ENST00000450188 156 ntBASIC1.97□□□□□ -2.09
TTC3P53804 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.97□□□□□ -2.09
TTC3P53804 DNAJC19P9-201ENST00000555084 351 ntBASIC1.97□□□□□ -2.09
TTC3P53804 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
TTC3P53804 RNU1-22P-201ENST00000363334 158 ntBASIC1.96□□□□□ -2.09
TTC3P53804 Y_RNA.229-201ENST00000364347 113 ntBASIC1.96□□□□□ -2.09
TTC3P53804 Y_RNA.584-201ENST00000391090 114 ntBASIC1.96□□□□□ -2.09
TTC3P53804 MIR1262-201ENST00000408276 93 ntBASIC1.96□□□□□ -2.09
TTC3P53804 CYP2C59P-201ENST00000457790 269 ntBASIC1.96□□□□□ -2.09
TTC3P53804 MIR3121-201ENST00000579680 77 ntBASIC1.96□□□□□ -2.09
TTC3P53804 AL049861.1-201ENST00000603130 150 ntBASIC1.96□□□□□ -2.09
TTC3P53804 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TTC3P53804 RNU4-11P-201ENST00000365287 132 ntBASIC1.96□□□□□ -2.1
TTC3P53804 Y_RNA.338-201ENST00000365320 114 ntBASIC1.96□□□□□ -2.1
TTC3P53804 MIR539-201ENST00000365690 78 ntBASIC1.96□□□□□ -2.1
TTC3P53804 Y_RNA.420-201ENST00000384043 110 ntBASIC1.96□□□□□ -2.1
TTC3P53804 Y_RNA.432-201ENST00000384087 111 ntBASIC1.96□□□□□ -2.1
TTC3P53804 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
TTC3P53804 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
TTC3P53804 AL049830.1-201ENST00000468034 425 ntBASIC1.96□□□□□ -2.1
TTC3P53804 RNU6-1291P-201ENST00000516591 104 ntBASIC1.96□□□□□ -2.1
TTC3P53804 AL359881.1-201ENST00000602916 267 ntBASIC1.96□□□□□ -2.1
TTC3P53804 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TTC3P53804 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
TTC3P53804 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TTC3P53804 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TTC3P53804 MIRLET7G-201ENST00000362280 84 ntBASIC1.95□□□□□ -2.1
TTC3P53804 Y_RNA.251-201ENST00000364551 99 ntBASIC1.95□□□□□ -2.1
TTC3P53804 MIR562-201ENST00000384894 95 ntBASIC1.95□□□□□ -2.1
TTC3P53804 AP1B1P2-201ENST00000416196 106 ntBASIC1.95□□□□□ -2.1
TTC3P53804 AC008134.1-201ENST00000420943 193 ntBASIC1.95□□□□□ -2.1
TTC3P53804 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.95□□□□□ -2.1
TTC3P53804 AL365205.2-201ENST00000594586 68 ntBASIC1.95□□□□□ -2.1
TTC3P53804 snoU13.31-201ENST00000607291 104 ntBASIC1.95□□□□□ -2.1
TTC3P53804 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
TTC3P53804 MIR340-201ENST00000362125 95 ntBASIC1.95□□□□□ -2.1
TTC3P53804 RNU6-661P-201ENST00000362409 107 ntBASIC1.95□□□□□ -2.1
TTC3P53804 RNU1-58P-201ENST00000362413 163 ntBASIC1.95□□□□□ -2.1
TTC3P53804 RNU6-743P-201ENST00000364151 106 ntBASIC1.95□□□□□ -2.1
TTC3P53804 RNA5SP205-201ENST00000364653 136 ntBASIC1.95□□□□□ -2.1
TTC3P53804 AL445687.1-201ENST00000439946 251 ntBASIC1.95□□□□□ -2.1
TTC3P53804 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
TTC3P53804 RNU7-197P-201ENST00000458836 62 ntBASIC1.95□□□□□ -2.1
TTC3P53804 AL163195.1-201ENST00000496941 348 ntBASIC1.95□□□□□ -2.1
TTC3P53804 RNU1-142P-201ENST00000516682 145 ntBASIC1.95□□□□□ -2.1
TTC3P53804 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
TTC3P53804 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TTC3P53804 Y_RNA.164-201ENST00000363709 102 ntBASIC1.94□□□□□ -2.1
TTC3P53804 MIR1323-201ENST00000408090 73 ntBASIC1.94□□□□□ -2.1
TTC3P53804 RNU6-693P-201ENST00000516134 107 ntBASIC1.94□□□□□ -2.1
TTC3P53804 AC026271.5-201ENST00000577873 130 ntBASIC1.94□□□□□ -2.1
TTC3P53804 MIR5694-201ENST00000581190 76 ntBASIC1.94□□□□□ -2.1
TTC3P53804 AC091895.1-201ENST00000624494 256 ntBASIC1.94□□□□□ -2.1
TTC3P53804 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TTC3P53804 RNA5SP493-201ENST00000364115 91 ntBASIC1.93□□□□□ -2.1
TTC3P53804 RNU6-1072P-201ENST00000384703 107 ntBASIC1.93□□□□□ -2.1
TTC3P53804 Y_RNA.563-201ENST00000384707 108 ntBASIC1.93□□□□□ -2.1
TTC3P53804 RNU6-443P-201ENST00000384780 107 ntBASIC1.93□□□□□ -2.1
TTC3P53804 MIR548A2-201ENST00000384956 97 ntBASIC1.93□□□□□ -2.1
TTC3P53804 RNU6-460P-201ENST00000391158 108 ntBASIC1.93□□□□□ -2.1
TTC3P53804 RNU6-735P-201ENST00000410612 107 ntBASIC1.93□□□□□ -2.1
TTC3P53804 MTATP6P29-201ENST00000415057 132 ntBASIC1.93□□□□□ -2.1
TTC3P53804 RNU6-479P-201ENST00000516348 105 ntBASIC1.93□□□□□ -2.1
TTC3P53804 SNORA18.4-201ENST00000516440 124 ntBASIC1.93□□□□□ -2.1
TTC3P53804 AC131055.1-201ENST00000584626 316 ntBASIC1.93□□□□□ -2.1
TTC3P53804 AC097639.2-201ENST00000603159 172 ntBASIC1.93□□□□□ -2.1
TTC3P53804 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.93□□□□□ -2.1
TTC3P53804 RNA5SP37-201ENST00000365420 130 ntBASIC1.93□□□□□ -2.1
TTC3P53804 RNU6-136P-201ENST00000384663 107 ntBASIC1.93□□□□□ -2.1
TTC3P53804 MIR520G-201ENST00000385064 90 ntBASIC1.93□□□□□ -2.1
TTC3P53804 BTF3P4-201ENST00000418852 495 ntBASIC1.93□□□□□ -2.1
TTC3P53804 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.93□□□□□ -2.1
TTC3P53804 RNU7-99P-201ENST00000516271 62 ntBASIC1.93□□□□□ -2.1
TTC3P53804 SNORA25.15-201ENST00000516487 89 ntBASIC1.93□□□□□ -2.1
TTC3P53804 IGKV1-22-201ENST00000524313 326 ntBASIC1.93□□□□□ -2.1
TTC3P53804 AL358944.1-201ENST00000528537 144 ntBASIC1.93□□□□□ -2.1
TTC3P53804 AC121758.2-201ENST00000553271 193 ntBASIC1.93□□□□□ -2.1
TTC3P53804 U4atac.1-201ENST00000618345 95 ntBASIC1.93□□□□□ -2.1
TTC3P53804 U6.108-201ENST00000637764 58 ntBASIC1.93□□□□□ -2.1
TTC3P53804 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
TTC3P53804 RNU6-1084P-201ENST00000362498 107 ntBASIC1.92□□□□□ -2.1
TTC3P53804 RNU1-96P-201ENST00000364163 162 ntBASIC1.92□□□□□ -2.1
TTC3P53804 RNU4-52P-201ENST00000384209 138 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms