Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PRIM1P49642 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PRIM1P49642 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRIM1P49642 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRIM1P49642 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRIM1P49642 Y_RNA.155-201ENST00000363632 101 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 SNORA68.1-201ENST00000364537 132 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 SNORA18-201ENST00000384416 132 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 RNU6-160P-201ENST00000384591 107 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 RNU6-1328P-201ENST00000410938 106 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 AL109933.2-201ENST00000452651 260 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 RPS27P29-201ENST00000463110 252 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 AC104984.5-201ENST00000586878 94 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 MIR6715A-201ENST00000615929 79 ntBASIC4.01□□□□□ -1.77
PRIM1P49642 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRIM1P49642 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRIM1P49642 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRIM1P49642 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4□□□□□ -1.77
PRIM1P49642 RNA5SP432-201ENST00000362480 116 ntBASIC4□□□□□ -1.77
PRIM1P49642 Y_RNA.290-201ENST00000364879 114 ntBASIC4□□□□□ -1.77
PRIM1P49642 RNU6-424P-201ENST00000384367 105 ntBASIC4□□□□□ -1.77
PRIM1P49642 Y_RNA.531-201ENST00000384589 121 ntBASIC4□□□□□ -1.77
PRIM1P49642 SNORA26.7-201ENST00000391288 122 ntBASIC4□□□□□ -1.77
PRIM1P49642 RN7SKP200-201ENST00000410564 320 ntBASIC4□□□□□ -1.77
PRIM1P49642 CST9LP2-201ENST00000437612 320 ntBASIC4□□□□□ -1.77
PRIM1P49642 AC105272.1-201ENST00000438604 198 ntBASIC4□□□□□ -1.77
PRIM1P49642 HMGN1P18-201ENST00000457642 277 ntBASIC4□□□□□ -1.77
PRIM1P49642 RN7SL297P-201ENST00000483161 293 ntBASIC4□□□□□ -1.77
PRIM1P49642 AC113410.1-201ENST00000505029 247 ntBASIC4□□□□□ -1.77
PRIM1P49642 AC023141.11-201ENST00000508864 202 ntBASIC4□□□□□ -1.77
PRIM1P49642 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRIM1P49642 MIR148B-201ENST00000362252 99 ntBASIC3.99□□□□□ -1.77
PRIM1P49642 RNU4-82P-201ENST00000362443 140 ntBASIC3.99□□□□□ -1.77
PRIM1P49642 RNU6-832P-201ENST00000363319 107 ntBASIC3.99□□□□□ -1.77
PRIM1P49642 SNORD56.3-201ENST00000363507 71 ntBASIC3.99□□□□□ -1.77
PRIM1P49642 RNU6-1124P-201ENST00000384169 107 ntBASIC3.99□□□□□ -1.77
PRIM1P49642 RNA5SP144-201ENST00000410846 116 ntBASIC3.99□□□□□ -1.77
PRIM1P49642 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.99□□□□□ -1.77
PRIM1P49642 SNORA64.4-201ENST00000516632 81 ntBASIC3.99□□□□□ -1.77
PRIM1P49642 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRIM1P49642 SNORD45B-201ENST00000364617 72 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 SNORA27-201ENST00000384323 126 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 AL451046.2-201ENST00000403074 277 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 MRPL35P3-201ENST00000421557 364 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 AL163195.1-201ENST00000496941 348 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 RNU6-667P-201ENST00000517186 102 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 SNORA28-201ENST00000606769 126 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 AC087741.2-201ENST00000619415 172 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 MIR203B-201ENST00000636080 86 ntBASIC3.98□□□□□ -1.77
PRIM1P49642 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRIM1P49642 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRIM1P49642 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
PRIM1P49642 AC062016.1-201ENST00000355719 319 ntBASIC3.97□□□□□ -1.77
PRIM1P49642 Y_RNA.360-201ENST00000365512 102 ntBASIC3.97□□□□□ -1.77
PRIM1P49642 RNA5SP184-201ENST00000411071 108 ntBASIC3.97□□□□□ -1.77
PRIM1P49642 AL445687.1-201ENST00000439946 251 ntBASIC3.97□□□□□ -1.77
PRIM1P49642 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.97□□□□□ -1.77
PRIM1P49642 RPL39P39-201ENST00000455840 151 ntBASIC3.97□□□□□ -1.77
PRIM1P49642 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.97□□□□□ -1.77
PRIM1P49642 MIR3618-201ENST00000580330 88 ntBASIC3.97□□□□□ -1.77
PRIM1P49642 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRIM1P49642 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRIM1P49642 AC093010.3-201ENST00000570269 15214 ntBASIC3.97□□□□□ -1.77
PRIM1P49642 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.97□□□□□ -1.77
PRIM1P49642 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRIM1P49642 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
PRIM1P49642 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PRIM1P49642 RNU6-170P-201ENST00000362832 104 ntBASIC3.96□□□□□ -1.78
PRIM1P49642 RNU4-67P-201ENST00000364569 141 ntBASIC3.96□□□□□ -1.78
PRIM1P49642 RNU6-813P-201ENST00000384691 107 ntBASIC3.96□□□□□ -1.78
PRIM1P49642 TRIAP1P1-201ENST00000427062 225 ntBASIC3.96□□□□□ -1.78
PRIM1P49642 RNU2-11P-201ENST00000459191 187 ntBASIC3.96□□□□□ -1.78
PRIM1P49642 AC022137.1-201ENST00000483735 151 ntBASIC3.96□□□□□ -1.78
PRIM1P49642 RNU6-998P-201ENST00000515894 101 ntBASIC3.96□□□□□ -1.78
PRIM1P49642 RNU7-61P-201ENST00000515897 61 ntBASIC3.96□□□□□ -1.78
PRIM1P49642 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.96□□□□□ -1.78
PRIM1P49642 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.96□□□□□ -1.78
PRIM1P49642 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-34-201ENST00000362441 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-12-201ENST00000362583 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-29-201ENST00000362834 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-9-201ENST00000362912 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-21-201ENST00000362963 81 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-14-201ENST00000363090 81 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-13-201ENST00000363358 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-41-201ENST00000363608 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-11-201ENST00000363616 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-5-201ENST00000363633 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-39-201ENST00000363694 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-4-201ENST00000363810 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-16-201ENST00000363887 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-6-201ENST00000363942 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-42-201ENST00000364273 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-15-201ENST00000364809 81 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-1-201ENST00000364961 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-26-201ENST00000365067 82 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-10-201ENST00000365073 81 ntBASIC3.95□□□□□ -1.78
PRIM1P49642 SNORD115-43-201ENST00000365503 82 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms