Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 SNORD45.3-201ENST00000363836 72 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 Y_RNA.253-201ENST00000364562 112 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 RNU6-643P-201ENST00000384018 107 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 RNA5SP501-201ENST00000410990 112 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 SNRPGP8-201ENST00000454064 226 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 AL358944.1-201ENST00000528537 144 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 AC022217.4-201ENST00000604389 163 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 uc_338.4-201ENST00000616635 176 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.15□□□□□ -2.07
NPTX2P47972 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
NPTX2P47972 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
NPTX2P47972 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 RNU6-449P-201ENST00000383914 107 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 MIR562-201ENST00000384894 95 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 RNU4-43P-201ENST00000410628 137 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 AC006461.1-201ENST00000412637 326 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 RPS27P1-201ENST00000450552 247 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 snoU13.26-201ENST00000459452 105 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 HMGN1P7-201ENST00000491722 313 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 AC107027.2-201ENST00000512197 115 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 RNU7-121P-201ENST00000516604 62 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 AP002004.2-201ENST00000531656 154 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 MIR5094-201ENST00000578766 85 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 AC069114.2-201ENST00000604699 304 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 JPX_2.1-201ENST00000614161 69 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 MTND1P7-201ENST00000632801 297 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 AL359851.1-201ENST00000569460 4997 ntBASIC2.14□□□□□ -2.07
NPTX2P47972 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NPTX2P47972 SNORA48.1-201ENST00000390879 135 ntBASIC2.13□□□□□ -2.07
NPTX2P47972 AC245047.4-201ENST00000433189 144 ntBASIC2.13□□□□□ -2.07
NPTX2P47972 AL392103.1-201ENST00000447000 198 ntBASIC2.13□□□□□ -2.07
NPTX2P47972 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
NPTX2P47972 AC084364.2-201ENST00000546924 395 ntBASIC2.13□□□□□ -2.07
NPTX2P47972 RNU6-1019P-201ENST00000364424 107 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 RNU6-484P-201ENST00000384016 107 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NPTX2P47972 RNA5SP109-201ENST00000391010 116 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 MIR1289-2-201ENST00000408360 111 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 NDUFA4P2-201ENST00000489989 244 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 SNORD77.4-201ENST00000516158 81 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 RNVU1-2-201ENST00000516326 135 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 AL591926.4-201ENST00000616895 298 ntBASIC2.12□□□□□ -2.07
NPTX2P47972 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NPTX2P47972 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NPTX2P47972 RNU6-818P-201ENST00000364837 108 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 RNU2-55P-201ENST00000411146 174 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 AC245047.3-201ENST00000429428 127 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 SNRPGP10-201ENST00000432323 225 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 AC023449.1-201ENST00000454464 154 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 AL049830.1-201ENST00000468034 425 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 RNU2-56P-201ENST00000516826 190 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
NPTX2P47972 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
NPTX2P47972 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NPTX2P47972 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NPTX2P47972 MIR126-201ENST00000362291 85 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 RNU6-151P-201ENST00000364158 107 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 Y_RNA.432-201ENST00000384087 111 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 SNORA12.1-201ENST00000390873 148 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 AC019129.1-201ENST00000403786 261 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 RNA5SP57-201ENST00000459463 123 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 SNORD116-25-201ENST00000516517 92 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 RNU7-149P-201ENST00000516739 59 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 Y_RNA.778-201ENST00000620203 90 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 MIR3658-201ENST00000636291 56 ntBASIC2.1□□□□□ -2.07
NPTX2P47972 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NPTX2P47972 Y_RNA.337-201ENST00000365312 102 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 RNU6-1138P-201ENST00000365359 106 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 Y_RNA.400-201ENST00000383963 111 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 U8.13-201ENST00000390842 128 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 OR9P1P-201ENST00000496431 281 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 RNU6-1299P-201ENST00000516316 100 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 RNU6-197P-201ENST00000516680 100 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.09□□□□□ -2.07
NPTX2P47972 AC022254.1-201ENST00000567857 235 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 DNAJC19P2-201ENST00000593340 302 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
NPTX2P47972 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
NPTX2P47972 SNORA79-201ENST00000408376 140 ntBASIC2.08□□□□□ -2.08
NPTX2P47972 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.08□□□□□ -2.08
NPTX2P47972 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
NPTX2P47972 MIR8054-201ENST00000620877 86 ntBASIC2.08□□□□□ -2.08
NPTX2P47972 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NPTX2P47972 Y_RNA.91-201ENST00000363042 107 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 SNORA63D-201ENST00000364359 132 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 RNU6-768P-201ENST00000384683 107 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 MIR522-201ENST00000385071 87 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.07□□□□□ -2.08
NPTX2P47972 MLLT10P1-201ENST00000418346 262 ntBASIC2.07□□□□□ -2.08
NPTX2P47972 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms