Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.45□□□□□ -1.86
VARSP26640 AC096644.4-201ENST00000563417 2912 ntBASIC3.45□□□□□ -1.86
VARSP26640 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VARSP26640 AC092881.1-201ENST00000638218 2733 ntBASIC3.44□□□□□ -1.86
VARSP26640 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.44□□□□□ -1.86
VARSP26640 MIR30E-201ENST00000362104 92 ntBASIC3.44□□□□□ -1.86
VARSP26640 Y_RNA.171-201ENST00000363760 102 ntBASIC3.44□□□□□ -1.86
VARSP26640 SNORA25.6-201ENST00000364121 118 ntBASIC3.44□□□□□ -1.86
VARSP26640 Y_RNA.377-201ENST00000365644 108 ntBASIC3.44□□□□□ -1.86
VARSP26640 Y_RNA.426-201ENST00000384068 113 ntBASIC3.44□□□□□ -1.86
VARSP26640 RNU6-1201P-201ENST00000384227 107 ntBASIC3.44□□□□□ -1.86
VARSP26640 RNU6-616P-201ENST00000384353 107 ntBASIC3.44□□□□□ -1.86
VARSP26640 RNVU1-14-201ENST00000384770 164 ntBASIC3.44□□□□□ -1.86
VARSP26640 MIR561-201ENST00000385216 97 ntBASIC3.44□□□□□ -1.86
VARSP26640 RNU2-63P-201ENST00000410792 194 ntBASIC3.44□□□□□ -1.86
VARSP26640 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.44□□□□□ -1.86
VARSP26640 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.44□□□□□ -1.86
VARSP26640 CYCSP4-201ENST00000429682 331 ntBASIC3.44□□□□□ -1.86
VARSP26640 AC114811.1-201ENST00000507207 168 ntBASIC3.44□□□□□ -1.86
VARSP26640 AC023141.11-201ENST00000508864 202 ntBASIC3.44□□□□□ -1.86
VARSP26640 MIR4668-201ENST00000582284 70 ntBASIC3.44□□□□□ -1.86
VARSP26640 AC022149.2-201ENST00000621061 203 ntBASIC3.44□□□□□ -1.86
VARSP26640 U4.6-201ENST00000621618 127 ntBASIC3.44□□□□□ -1.86
VARSP26640 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VARSP26640 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.43□□□□□ -1.86
VARSP26640 RNU6-862P-201ENST00000362804 105 ntBASIC3.43□□□□□ -1.86
VARSP26640 Y_RNA.620-201ENST00000411009 88 ntBASIC3.43□□□□□ -1.86
VARSP26640 CST2P1-201ENST00000425770 87 ntBASIC3.43□□□□□ -1.86
VARSP26640 AC245047.3-201ENST00000429428 127 ntBASIC3.43□□□□□ -1.86
VARSP26640 RNU7-45P-201ENST00000459460 63 ntBASIC3.43□□□□□ -1.86
VARSP26640 RN7SL297P-201ENST00000483161 293 ntBASIC3.43□□□□□ -1.86
VARSP26640 RNU2-27P-201ENST00000516185 142 ntBASIC3.43□□□□□ -1.86
VARSP26640 AC090821.2-201ENST00000523552 176 ntBASIC3.43□□□□□ -1.86
VARSP26640 AC005000.2-201ENST00000605468 310 ntBASIC3.43□□□□□ -1.86
VARSP26640 SCARNA15.3-201ENST00000626315 122 ntBASIC3.43□□□□□ -1.86
VARSP26640 SCARNA4.1-201ENST00000628597 123 ntBASIC3.43□□□□□ -1.86
VARSP26640 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VARSP26640 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VARSP26640 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.42□□□□□ -1.86
VARSP26640 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
VARSP26640 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VARSP26640 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
VARSP26640 SNORA68.1-201ENST00000364537 132 ntBASIC3.42□□□□□ -1.86
VARSP26640 RNU6-163P-201ENST00000384396 106 ntBASIC3.42□□□□□ -1.86
VARSP26640 RNY1P4-201ENST00000384595 115 ntBASIC3.42□□□□□ -1.86
VARSP26640 AL606517.2-201ENST00000442855 241 ntBASIC3.42□□□□□ -1.86
VARSP26640 RNU7-28P-201ENST00000516759 62 ntBASIC3.42□□□□□ -1.86
VARSP26640 RNU6-1116P-201ENST00000517269 99 ntBASIC3.42□□□□□ -1.86
VARSP26640 AC019288.1-201ENST00000557918 224 ntBASIC3.42□□□□□ -1.86
VARSP26640 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.42□□□□□ -1.86
VARSP26640 AP003355.3-201ENST00000623465 114 ntBASIC3.42□□□□□ -1.86
VARSP26640 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VARSP26640 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.42□□□□□ -1.86
VARSP26640 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VARSP26640 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.42□□□□□ -1.86
VARSP26640 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.42□□□□□ -1.86
VARSP26640 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
VARSP26640 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
VARSP26640 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VARSP26640 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VARSP26640 MIR148B-201ENST00000362252 99 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-34-201ENST00000362441 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-12-201ENST00000362583 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-29-201ENST00000362834 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-9-201ENST00000362912 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-21-201ENST00000362963 81 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-14-201ENST00000363090 81 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-41-201ENST00000363608 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-11-201ENST00000363616 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-5-201ENST00000363633 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-39-201ENST00000363694 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-4-201ENST00000363810 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-6-201ENST00000363942 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORA38.1-201ENST00000364172 131 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-42-201ENST00000364273 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-15-201ENST00000364809 81 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-26-201ENST00000365067 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-10-201ENST00000365073 81 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-43-201ENST00000365503 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD115-36-201ENST00000365629 82 ntBASIC3.41□□□□□ -1.86
VARSP26640 SNORD77B-201ENST00000391112 67 ntBASIC3.41□□□□□ -1.86
VARSP26640 Y_RNA.611-201ENST00000410682 108 ntBASIC3.41□□□□□ -1.86
VARSP26640 RNU2-40P-201ENST00000410833 196 ntBASIC3.41□□□□□ -1.86
VARSP26640 AL135938.1-201ENST00000443141 297 ntBASIC3.41□□□□□ -1.86
VARSP26640 AC018868.1-201ENST00000491307 315 ntBASIC3.41□□□□□ -1.86
VARSP26640 RN7SL504P-201ENST00000494496 287 ntBASIC3.41□□□□□ -1.86
VARSP26640 RNU6-1018P-201ENST00000516577 106 ntBASIC3.41□□□□□ -1.86
VARSP26640 RNU6-1258P-201ENST00000516911 111 ntBASIC3.41□□□□□ -1.86
VARSP26640 AC026333.2-201ENST00000542164 106 ntBASIC3.41□□□□□ -1.86
VARSP26640 MIR4662A-201ENST00000637499 67 ntBASIC3.41□□□□□ -1.86
VARSP26640 AL512310.12-203ENST00000640543 90 ntBASIC3.41□□□□□ -1.86
VARSP26640 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VARSP26640 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VARSP26640 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VARSP26640 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VARSP26640 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
VARSP26640 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VARSP26640 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.4□□□□□ -1.86
VARSP26640 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.86
VARSP26640 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms