Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.11□□□□□ -1.91
ATP2B4P23634 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.11□□□□□ -1.91
ATP2B4P23634 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATP2B4P23634 RNU6-834P-201ENST00000362367 110 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 Y_RNA.353-201ENST00000365440 108 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 Y_RNA.563-201ENST00000384707 108 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 MIR1283-2-201ENST00000408621 87 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 AL158823.1-201ENST00000418441 478 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 AL158147.1-201ENST00000443970 75 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 HMGN2P32-201ENST00000444648 269 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 SNORD45.4-201ENST00000516629 73 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 Y_RNA.712-201ENST00000517011 92 ntBASIC3.11□□□□□ -1.91
ATP2B4P23634 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.11□□□□□ -1.91
ATP2B4P23634 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATP2B4P23634 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATP2B4P23634 Y_RNA.114-201ENST00000363265 113 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 Y_RNA.280-201ENST00000364765 112 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 Y_RNA.336-201ENST00000365307 109 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 RNU6-950P-201ENST00000384651 107 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 MIR548A2-201ENST00000384956 97 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 MIR518F-201ENST00000384973 87 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 MIR548O-201ENST00000408583 114 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 RNU4-53P-201ENST00000410828 140 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 AF228730.3-201ENST00000436691 102 ntBASIC3.1□□□□□ -1.91
ATP2B4P23634 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.09□□□□□ -1.91
ATP2B4P23634 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.91
ATP2B4P23634 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ATP2B4P23634 U8.2-201ENST00000363156 134 ntBASIC3.09□□□□□ -1.91
ATP2B4P23634 HMGN2P39-201ENST00000398005 273 ntBASIC3.09□□□□□ -1.91
ATP2B4P23634 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.09□□□□□ -1.91
ATP2B4P23634 HMGN2P3-201ENST00000433603 273 ntBASIC3.09□□□□□ -1.91
ATP2B4P23634 HMGN2P5-201ENST00000436882 273 ntBASIC3.09□□□□□ -1.91
ATP2B4P23634 RNU5E-3P-201ENST00000515913 68 ntBASIC3.09□□□□□ -1.91
ATP2B4P23634 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ATP2B4P23634 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATP2B4P23634 RNU6-647P-201ENST00000364243 107 ntBASIC3.08□□□□□ -1.92
ATP2B4P23634 SNORA80E-201ENST00000384744 137 ntBASIC3.08□□□□□ -1.92
ATP2B4P23634 RN7SKP200-201ENST00000410564 320 ntBASIC3.08□□□□□ -1.92
ATP2B4P23634 Z98742.3-201ENST00000418637 326 ntBASIC3.08□□□□□ -1.92
ATP2B4P23634 RNA5SP76-201ENST00000516277 87 ntBASIC3.08□□□□□ -1.92
ATP2B4P23634 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.08□□□□□ -1.92
ATP2B4P23634 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.08□□□□□ -1.92
ATP2B4P23634 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
ATP2B4P23634 MTND5P32-201ENST00000560711 1802 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATP2B4P23634 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATP2B4P23634 Y_RNA.81-201ENST00000362997 102 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 RNU6-268P-201ENST00000364174 107 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 RNU6-309P-201ENST00000364573 106 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 SNORD77.3-201ENST00000391113 65 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 AL359511.1-201ENST00000402970 211 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.07□□□□□ -1.92
ATP2B4P23634 RNU6-772P-201ENST00000516042 105 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 AC134878.1-201ENST00000619901 243 ntBASIC3.07□□□□□ -1.92
ATP2B4P23634 SNORA63D-201ENST00000364359 132 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATP2B4P23634 Y_RNA.410-201ENST00000383992 113 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 RNU6-1056P-201ENST00000383996 107 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 SNORD20-201ENST00000384550 80 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ATP2B4P23634 AL034345.1-201ENST00000407768 123 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 RN7SKP192-201ENST00000411291 327 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 RNA5SP270-201ENST00000411361 118 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 SNRPGP14-201ENST00000435400 219 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 CYCTP-201ENST00000504253 315 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 RNA5SP385-201ENST00000515947 110 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ATP2B4P23634 AL022345.2-201ENST00000606307 135 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.06□□□□□ -1.92
ATP2B4P23634 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATP2B4P23634 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2B4P23634 Y_RNA.525-201ENST00000384570 113 ntBASIC3.05□□□□□ -1.92
ATP2B4P23634 SNORA48.1-201ENST00000390879 135 ntBASIC3.05□□□□□ -1.92
ATP2B4P23634 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.05□□□□□ -1.92
ATP2B4P23634 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.05□□□□□ -1.92
ATP2B4P23634 RNVU1-2-201ENST00000516326 135 ntBASIC3.05□□□□□ -1.92
ATP2B4P23634 SNORA31.10-201ENST00000516482 106 ntBASIC3.05□□□□□ -1.92
ATP2B4P23634 RNU7-25P-201ENST00000516544 62 ntBASIC3.05□□□□□ -1.92
ATP2B4P23634 AC133485.4-201ENST00000561835 220 ntBASIC3.05□□□□□ -1.92
ATP2B4P23634 AC138907.4-201ENST00000570107 226 ntBASIC3.05□□□□□ -1.92
ATP2B4P23634 MIR5197-201ENST00000583721 112 ntBASIC3.05□□□□□ -1.92
ATP2B4P23634 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.05□□□□□ -1.92
ATP2B4P23634 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.05□□□□□ -1.92
ATP2B4P23634 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATP2B4P23634 RNU6-215P-201ENST00000365169 102 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 RNU6-163P-201ENST00000384396 106 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.04□□□□□ -1.92
ATP2B4P23634 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.04□□□□□ -1.92
ATP2B4P23634 RNA5SP236-201ENST00000516169 116 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 RNU6-1061P-201ENST00000516530 99 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 RNU6-1149P-201ENST00000516810 97 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 AC027279.3-201ENST00000625055 122 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 MIR3914-2-201ENST00000637339 95 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
ATP2B4P23634 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATP2B4P23634 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms