Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNU6-1328P-201ENST00000410938 106 ntBASIC3.15□□□□□ -1.91
THBS1P07996 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
THBS1P07996 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.15□□□□□ -1.91
THBS1P07996 RNU7-113P-201ENST00000459273 62 ntBASIC3.15□□□□□ -1.91
THBS1P07996 RN7SL504P-201ENST00000494496 287 ntBASIC3.15□□□□□ -1.91
THBS1P07996 RPPH1-2P-201ENST00000516688 293 ntBASIC3.15□□□□□ -1.91
THBS1P07996 MIR2276-201ENST00000516886 89 ntBASIC3.15□□□□□ -1.91
THBS1P07996 MIR3152-201ENST00000579801 74 ntBASIC3.15□□□□□ -1.91
THBS1P07996 ZNF861P-201ENST00000588126 639 ntBASIC3.15□□□□□ -1.91
THBS1P07996 SNORA28-201ENST00000606769 126 ntBASIC3.15□□□□□ -1.91
THBS1P07996 AC095038.3-201ENST00000634439 195 ntBASIC3.15□□□□□ -1.91
THBS1P07996 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
THBS1P07996 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
THBS1P07996 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
THBS1P07996 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.14□□□□□ -1.91
THBS1P07996 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
THBS1P07996 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
THBS1P07996 RNU6-787P-201ENST00000384032 107 ntBASIC3.14□□□□□ -1.91
THBS1P07996 SNORA70.7-201ENST00000384159 133 ntBASIC3.14□□□□□ -1.91
THBS1P07996 MIR491-201ENST00000384877 84 ntBASIC3.14□□□□□ -1.91
THBS1P07996 AC245047.3-201ENST00000429428 127 ntBASIC3.14□□□□□ -1.91
THBS1P07996 SCARNA13-201ENST00000516672 275 ntBASIC3.14□□□□□ -1.91
THBS1P07996 RNU6-667P-201ENST00000517186 102 ntBASIC3.14□□□□□ -1.91
THBS1P07996 IGLV3-17-201ENST00000519099 244 ntBASIC3.14□□□□□ -1.91
THBS1P07996 MIR5195-201ENST00000583555 115 ntBASIC3.14□□□□□ -1.91
THBS1P07996 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
THBS1P07996 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.13□□□□□ -1.91
THBS1P07996 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
THBS1P07996 SNORD115-2-201ENST00000362842 82 ntBASIC3.13□□□□□ -1.91
THBS1P07996 SNORD115-20-201ENST00000365099 82 ntBASIC3.13□□□□□ -1.91
THBS1P07996 RNU6-1201P-201ENST00000384227 107 ntBASIC3.13□□□□□ -1.91
THBS1P07996 RNU6-679P-201ENST00000391003 106 ntBASIC3.13□□□□□ -1.91
THBS1P07996 SNORA26.7-201ENST00000391288 122 ntBASIC3.13□□□□□ -1.91
THBS1P07996 RNA5SP261-201ENST00000410536 106 ntBASIC3.13□□□□□ -1.91
THBS1P07996 SNORA7.5-201ENST00000410672 110 ntBASIC3.13□□□□□ -1.91
THBS1P07996 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
THBS1P07996 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
THBS1P07996 AC090821.2-201ENST00000523552 176 ntBASIC3.13□□□□□ -1.91
THBS1P07996 AL513534.2-201ENST00000603836 250 ntBASIC3.13□□□□□ -1.91
THBS1P07996 AC027279.3-201ENST00000625055 122 ntBASIC3.13□□□□□ -1.91
THBS1P07996 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.13□□□□□ -1.91
THBS1P07996 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
THBS1P07996 RNU1-33P-201ENST00000364249 162 ntBASIC3.12□□□□□ -1.91
THBS1P07996 SNORA68.1-201ENST00000364537 132 ntBASIC3.12□□□□□ -1.91
THBS1P07996 RNU6-219P-201ENST00000364728 107 ntBASIC3.12□□□□□ -1.91
THBS1P07996 RNU6-163P-201ENST00000384396 106 ntBASIC3.12□□□□□ -1.91
THBS1P07996 MIR218-2-201ENST00000385006 110 ntBASIC3.12□□□□□ -1.91
THBS1P07996 RNU2-40P-201ENST00000410833 196 ntBASIC3.12□□□□□ -1.91
THBS1P07996 POLR2J4-204ENST00000418424 324 ntBASIC3.12□□□□□ -1.91
THBS1P07996 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
THBS1P07996 MIR4668-201ENST00000582284 70 ntBASIC3.12□□□□□ -1.91
THBS1P07996 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.12□□□□□ -1.91
THBS1P07996 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
THBS1P07996 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
THBS1P07996 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
THBS1P07996 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
THBS1P07996 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
THBS1P07996 MAPK10-322ENST00000641485 4530 ntBASIC3.11□□□□□ -1.91
THBS1P07996 Y_RNA.190-201ENST00000363964 101 ntBASIC3.11□□□□□ -1.91
THBS1P07996 SNORA1.2-201ENST00000365189 134 ntBASIC3.11□□□□□ -1.91
THBS1P07996 MIR490-201ENST00000384865 128 ntBASIC3.11□□□□□ -1.91
THBS1P07996 MIR592-201ENST00000384959 97 ntBASIC3.11□□□□□ -1.91
THBS1P07996 RNU6-1319P-201ENST00000390855 104 ntBASIC3.11□□□□□ -1.91
THBS1P07996 RNU6-747P-201ENST00000390928 104 ntBASIC3.11□□□□□ -1.91
THBS1P07996 RNU6-241P-201ENST00000391148 104 ntBASIC3.11□□□□□ -1.91
THBS1P07996 SNORA11.4-201ENST00000408823 129 ntBASIC3.11□□□□□ -1.91
THBS1P07996 Y_RNA.620-201ENST00000411009 88 ntBASIC3.11□□□□□ -1.91
THBS1P07996 RNU6-177P-201ENST00000411257 104 ntBASIC3.11□□□□□ -1.91
THBS1P07996 SNORA70.24-201ENST00000517233 118 ntBASIC3.11□□□□□ -1.91
THBS1P07996 uc_338.25-201ENST00000613756 156 ntBASIC3.11□□□□□ -1.91
THBS1P07996 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
THBS1P07996 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
THBS1P07996 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
THBS1P07996 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
THBS1P07996 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
THBS1P07996 SNORA25.6-201ENST00000364121 118 ntBASIC3.1□□□□□ -1.91
THBS1P07996 SNORA1.1-201ENST00000364671 133 ntBASIC3.1□□□□□ -1.91
THBS1P07996 SNORD17-201ENST00000390930 237 ntBASIC3.1□□□□□ -1.91
THBS1P07996 UBL5P3-201ENST00000475112 231 ntBASIC3.1□□□□□ -1.91
THBS1P07996 TRBV12-1-201ENST00000479785 344 ntBASIC3.1□□□□□ -1.91
THBS1P07996 MIR548Z-201ENST00000584743 97 ntBASIC3.1□□□□□ -1.91
THBS1P07996 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
THBS1P07996 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
THBS1P07996 AC092881.1-201ENST00000638218 2733 ntBASIC3.1□□□□□ -1.91
THBS1P07996 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
THBS1P07996 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
THBS1P07996 RNU6-1313P-201ENST00000362622 102 ntBASIC3.09□□□□□ -1.91
THBS1P07996 RNU6-1125P-201ENST00000363601 107 ntBASIC3.09□□□□□ -1.91
THBS1P07996 Y_RNA.313-201ENST00000365095 103 ntBASIC3.09□□□□□ -1.91
THBS1P07996 Y_RNA.430-201ENST00000384081 110 ntBASIC3.09□□□□□ -1.91
THBS1P07996 MIR1267-201ENST00000408723 78 ntBASIC3.09□□□□□ -1.91
THBS1P07996 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.09□□□□□ -1.91
THBS1P07996 AL135938.1-201ENST00000443141 297 ntBASIC3.09□□□□□ -1.91
THBS1P07996 RPS27P29-201ENST00000463110 252 ntBASIC3.09□□□□□ -1.91
THBS1P07996 AC114811.1-201ENST00000507207 168 ntBASIC3.09□□□□□ -1.91
THBS1P07996 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.09□□□□□ -1.91
THBS1P07996 MIR3651-201ENST00000630427 90 ntBASIC3.09□□□□□ -1.91
THBS1P07996 AL512310.12-203ENST00000640543 90 ntBASIC3.09□□□□□ -1.91
THBS1P07996 AC091304.10-201ENST00000641554 121 ntBASIC3.09□□□□□ -1.91
THBS1P07996 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms