Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RNA5SP37-201ENST00000365420 130 ntBASIC2.47□□□□□ -2.01
APPP05067 RNU6-484P-201ENST00000384016 107 ntBASIC2.47□□□□□ -2.01
APPP05067 MIR562-201ENST00000384894 95 ntBASIC2.47□□□□□ -2.01
APPP05067 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
APPP05067 RNU6-440P-201ENST00000390882 105 ntBASIC2.47□□□□□ -2.01
APPP05067 RNA5SP465-201ENST00000391195 109 ntBASIC2.47□□□□□ -2.01
APPP05067 AL603908.1-201ENST00000406098 201 ntBASIC2.47□□□□□ -2.01
APPP05067 STAG3L5P-204ENST00000443759 179 ntBASIC2.47□□□□□ -2.01
APPP05067 snoU13.26-201ENST00000459452 105 ntBASIC2.47□□□□□ -2.01
APPP05067 UBL5P3-201ENST00000475112 231 ntBASIC2.47□□□□□ -2.01
APPP05067 HMGN1P7-201ENST00000491722 313 ntBASIC2.47□□□□□ -2.01
APPP05067 RNU6-1212P-201ENST00000517023 104 ntBASIC2.47□□□□□ -2.01
APPP05067 uc_338.4-201ENST00000616635 176 ntBASIC2.47□□□□□ -2.01
APPP05067 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.01
APPP05067 RNU6-112P-201ENST00000363599 104 ntBASIC2.46□□□□□ -2.02
APPP05067 RNU7-149P-201ENST00000516739 59 ntBASIC2.46□□□□□ -2.02
APPP05067 RNU2-56P-201ENST00000516826 190 ntBASIC2.46□□□□□ -2.02
APPP05067 IGKV3-31-201ENST00000523109 329 ntBASIC2.46□□□□□ -2.02
APPP05067 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
APPP05067 MIR5002-201ENST00000584713 97 ntBASIC2.46□□□□□ -2.02
APPP05067 JPX_2.1-201ENST00000614161 69 ntBASIC2.46□□□□□ -2.02
APPP05067 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
APPP05067 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.46□□□□□ -2.02
APPP05067 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
APPP05067 RNU6-312P-201ENST00000364629 107 ntBASIC2.45□□□□□ -2.02
APPP05067 Y_RNA.486-201ENST00000384398 107 ntBASIC2.45□□□□□ -2.02
APPP05067 MIR515-2-201ENST00000384883 83 ntBASIC2.45□□□□□ -2.02
APPP05067 MIR515-1-201ENST00000384884 83 ntBASIC2.45□□□□□ -2.02
APPP05067 MIR522-201ENST00000385071 87 ntBASIC2.45□□□□□ -2.02
APPP05067 RNA5SP100-201ENST00000410903 110 ntBASIC2.45□□□□□ -2.02
APPP05067 RNA5SP59-201ENST00000410922 110 ntBASIC2.45□□□□□ -2.02
APPP05067 AL445646.1-201ENST00000431784 216 ntBASIC2.45□□□□□ -2.02
APPP05067 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.45□□□□□ -2.02
APPP05067 MRPS17P9-201ENST00000511924 393 ntBASIC2.45□□□□□ -2.02
APPP05067 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.45□□□□□ -2.02
APPP05067 MIR4431-201ENST00000579990 94 ntBASIC2.45□□□□□ -2.02
APPP05067 AC078899.2-201ENST00000595282 212 ntBASIC2.45□□□□□ -2.02
APPP05067 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.45□□□□□ -2.02
APPP05067 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.45□□□□□ -2.02
APPP05067 MIR7843-201ENST00000622274 79 ntBASIC2.45□□□□□ -2.02
APPP05067 SNORA63D-201ENST00000364359 132 ntBASIC2.44□□□□□ -2.02
APPP05067 SNORD50B-201ENST00000364995 70 ntBASIC2.44□□□□□ -2.02
APPP05067 RNA5SP496-201ENST00000391240 109 ntBASIC2.44□□□□□ -2.02
APPP05067 AL512604.1-201ENST00000404812 257 ntBASIC2.44□□□□□ -2.02
APPP05067 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
APPP05067 OR9P1P-201ENST00000496431 281 ntBASIC2.44□□□□□ -2.02
APPP05067 RNU7-200P-201ENST00000516105 62 ntBASIC2.44□□□□□ -2.02
APPP05067 SNORD116-25-201ENST00000516517 92 ntBASIC2.44□□□□□ -2.02
APPP05067 AP002004.2-201ENST00000531656 154 ntBASIC2.44□□□□□ -2.02
APPP05067 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.44□□□□□ -2.02
APPP05067 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
APPP05067 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
APPP05067 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
APPP05067 Y_RNA.265-201ENST00000364677 108 ntBASIC2.43□□□□□ -2.02
APPP05067 RNU6-728P-201ENST00000365375 104 ntBASIC2.43□□□□□ -2.02
APPP05067 RNU6-643P-201ENST00000384018 107 ntBASIC2.43□□□□□ -2.02
APPP05067 MIR504-201ENST00000385065 83 ntBASIC2.43□□□□□ -2.02
APPP05067 MIR548M-201ENST00000408260 86 ntBASIC2.43□□□□□ -2.02
APPP05067 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.43□□□□□ -2.02
APPP05067 CALM2P4-201ENST00000430810 426 ntBASIC2.43□□□□□ -2.02
APPP05067 snoU13.15-201ENST00000459407 104 ntBASIC2.43□□□□□ -2.02
APPP05067 SNORD77.4-201ENST00000516158 81 ntBASIC2.43□□□□□ -2.02
APPP05067 RNU2-19P-201ENST00000517288 84 ntBASIC2.43□□□□□ -2.02
APPP05067 MIR5688-201ENST00000580619 83 ntBASIC2.43□□□□□ -2.02
APPP05067 Pinc.1-201ENST00000616452 154 ntBASIC2.43□□□□□ -2.02
APPP05067 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.43□□□□□ -2.02
APPP05067 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.43□□□□□ -2.02
APPP05067 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
APPP05067 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
APPP05067 RNU6-151P-201ENST00000364158 107 ntBASIC2.42□□□□□ -2.02
APPP05067 RNU6-768P-201ENST00000384683 107 ntBASIC2.42□□□□□ -2.02
APPP05067 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.42□□□□□ -2.02
APPP05067 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.42□□□□□ -2.02
APPP05067 SNORA31.17-201ENST00000516953 127 ntBASIC2.42□□□□□ -2.02
APPP05067 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.42□□□□□ -2.02
APPP05067 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.41□□□□□ -2.02
APPP05067 Y_RNA.357-201ENST00000365487 109 ntBASIC2.41□□□□□ -2.02
APPP05067 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.41□□□□□ -2.02
APPP05067 RNU6-237P-201ENST00000515985 71 ntBASIC2.41□□□□□ -2.02
APPP05067 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.41□□□□□ -2.02
APPP05067 MIRLET7C-201ENST00000362160 84 ntBASIC2.4□□□□□ -2.03
APPP05067 SNORD114-1-201ENST00000362705 72 ntBASIC2.4□□□□□ -2.03
APPP05067 RNA5SP160-201ENST00000364866 120 ntBASIC2.4□□□□□ -2.03
APPP05067 RNU6-439P-201ENST00000384188 106 ntBASIC2.4□□□□□ -2.03
APPP05067 MIR676-201ENST00000390702 67 ntBASIC2.4□□□□□ -2.03
APPP05067 RNU6-239P-201ENST00000390990 99 ntBASIC2.4□□□□□ -2.03
APPP05067 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.4□□□□□ -2.03
APPP05067 RNU7-94P-201ENST00000459576 63 ntBASIC2.4□□□□□ -2.03
APPP05067 Y_RNA.666-201ENST00000516187 112 ntBASIC2.4□□□□□ -2.03
APPP05067 RNU1-40P-201ENST00000516816 164 ntBASIC2.4□□□□□ -2.03
APPP05067 RNU1-97P-201ENST00000516872 164 ntBASIC2.4□□□□□ -2.03
APPP05067 SNRPGP19-201ENST00000603826 189 ntBASIC2.4□□□□□ -2.03
APPP05067 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
APPP05067 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
APPP05067 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
APPP05067 RNU6-1082P-201ENST00000364574 107 ntBASIC2.39□□□□□ -2.03
APPP05067 Y_RNA.634-201ENST00000364811 113 ntBASIC2.39□□□□□ -2.03
APPP05067 RNA5SP138-201ENST00000365098 114 ntBASIC2.39□□□□□ -2.03
APPP05067 RNU4-11P-201ENST00000365287 132 ntBASIC2.39□□□□□ -2.03
APPP05067 Y_RNA.432-201ENST00000384087 111 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms