Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 SNORA72-201ENST00000384339 132 ntBASIC1.5□□□□□ -2.17
RAF1P04049 RNU6-440P-201ENST00000390882 105 ntBASIC1.5□□□□□ -2.17
RAF1P04049 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.5□□□□□ -2.17
RAF1P04049 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
RAF1P04049 snoU13.27-201ENST00000459278 104 ntBASIC1.5□□□□□ -2.17
RAF1P04049 RPS29P11-201ENST00000496507 171 ntBASIC1.5□□□□□ -2.17
RAF1P04049 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.5□□□□□ -2.17
RAF1P04049 AC127455.1-201ENST00000565496 145 ntBASIC1.5□□□□□ -2.17
RAF1P04049 MIR5692C2-201ENST00000577959 77 ntBASIC1.5□□□□□ -2.17
RAF1P04049 AL929325.1-201ENST00000603096 117 ntBASIC1.5□□□□□ -2.17
RAF1P04049 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
RAF1P04049 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RAF1P04049 Y_RNA.65-201ENST00000362846 100 ntBASIC1.49□□□□□ -2.17
RAF1P04049 RNU6-379P-201ENST00000363813 104 ntBASIC1.49□□□□□ -2.17
RAF1P04049 SNORA20.1-201ENST00000364790 130 ntBASIC1.49□□□□□ -2.17
RAF1P04049 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
RAF1P04049 RNU6-1080P-201ENST00000383982 107 ntBASIC1.49□□□□□ -2.17
RAF1P04049 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RAF1P04049 Y_RNA.590-201ENST00000410140 107 ntBASIC1.49□□□□□ -2.17
RAF1P04049 SNORA36B-201ENST00000410438 131 ntBASIC1.49□□□□□ -2.17
RAF1P04049 FTH1P12-201ENST00000432137 551 ntBASIC1.49□□□□□ -2.17
RAF1P04049 JTBP1-201ENST00000441314 247 ntBASIC1.49□□□□□ -2.17
RAF1P04049 RNU7-34P-201ENST00000459394 64 ntBASIC1.49□□□□□ -2.17
RAF1P04049 RPL23AP54-201ENST00000495129 419 ntBASIC1.49□□□□□ -2.17
RAF1P04049 RNA5SP445-201ENST00000515889 115 ntBASIC1.49□□□□□ -2.17
RAF1P04049 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
RAF1P04049 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.49□□□□□ -2.17
RAF1P04049 AC005357.1-201ENST00000588399 301 ntBASIC1.49□□□□□ -2.17
RAF1P04049 Y_RNA.489-201ENST00000384410 101 ntBASIC1.48□□□□□ -2.17
RAF1P04049 MIR562-201ENST00000384894 95 ntBASIC1.48□□□□□ -2.17
RAF1P04049 SNORA12.1-201ENST00000390873 148 ntBASIC1.48□□□□□ -2.17
RAF1P04049 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.48□□□□□ -2.17
RAF1P04049 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
RAF1P04049 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
RAF1P04049 SNORD116-28-201ENST00000516123 91 ntBASIC1.48□□□□□ -2.17
RAF1P04049 Y_RNA.679-201ENST00000516416 91 ntBASIC1.48□□□□□ -2.17
RAF1P04049 AL358944.1-201ENST00000528537 144 ntBASIC1.48□□□□□ -2.17
RAF1P04049 AP002004.2-201ENST00000531656 154 ntBASIC1.48□□□□□ -2.17
RAF1P04049 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.48□□□□□ -2.17
RAF1P04049 MIR4709-201ENST00000577272 72 ntBASIC1.48□□□□□ -2.17
RAF1P04049 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
RAF1P04049 AC011921.3-201ENST00000605540 361 ntBASIC1.48□□□□□ -2.17
RAF1P04049 MIR8063-201ENST00000621930 81 ntBASIC1.48□□□□□ -2.17
RAF1P04049 AC095038.3-201ENST00000634439 195 ntBASIC1.48□□□□□ -2.17
RAF1P04049 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.48□□□□□ -2.17
RAF1P04049 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RAF1P04049 MIR126-201ENST00000362291 85 ntBASIC1.47□□□□□ -2.17
RAF1P04049 RNU6-1205P-201ENST00000363625 106 ntBASIC1.47□□□□□ -2.17
RAF1P04049 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
RAF1P04049 Y_RNA.621-201ENST00000411065 96 ntBASIC1.47□□□□□ -2.17
RAF1P04049 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.47□□□□□ -2.17
RAF1P04049 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
RAF1P04049 snoU13.18-201ENST00000459483 104 ntBASIC1.47□□□□□ -2.17
RAF1P04049 AL049830.1-201ENST00000468034 425 ntBASIC1.47□□□□□ -2.17
RAF1P04049 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.47□□□□□ -2.17
RAF1P04049 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.47□□□□□ -2.17
RAF1P04049 RNU2-56P-201ENST00000516826 190 ntBASIC1.47□□□□□ -2.17
RAF1P04049 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.47□□□□□ -2.17
RAF1P04049 AC073349.3-201ENST00000617616 186 ntBASIC1.47□□□□□ -2.17
RAF1P04049 Y_RNA.203-201ENST00000364106 102 ntBASIC1.46□□□□□ -2.18
RAF1P04049 Y_RNA.224-201ENST00000364308 111 ntBASIC1.46□□□□□ -2.18
RAF1P04049 Y_RNA.292-201ENST00000364904 97 ntBASIC1.46□□□□□ -2.18
RAF1P04049 RNU6-203P-201ENST00000384038 104 ntBASIC1.46□□□□□ -2.18
RAF1P04049 Y_RNA.476-201ENST00000384347 108 ntBASIC1.46□□□□□ -2.18
RAF1P04049 AC004965.1-201ENST00000413033 213 ntBASIC1.46□□□□□ -2.18
RAF1P04049 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.46□□□□□ -2.18
RAF1P04049 RNU6-437P-201ENST00000459408 95 ntBASIC1.46□□□□□ -2.18
RAF1P04049 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.46□□□□□ -2.18
RAF1P04049 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.46□□□□□ -2.18
RAF1P04049 RNU6-388P-201ENST00000517012 105 ntBASIC1.46□□□□□ -2.18
RAF1P04049 RNU6-389P-201ENST00000517048 105 ntBASIC1.46□□□□□ -2.18
RAF1P04049 SNORA77B-201ENST00000578179 125 ntBASIC1.46□□□□□ -2.18
RAF1P04049 AL442067.1-201ENST00000613261 223 ntBASIC1.46□□□□□ -2.18
RAF1P04049 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RAF1P04049 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
RAF1P04049 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNU6-674P-201ENST00000363831 107 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNU4-10P-201ENST00000364383 140 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNU4-41P-201ENST00000364426 143 ntBASIC1.45□□□□□ -2.18
RAF1P04049 Y_RNA.253-201ENST00000364562 112 ntBASIC1.45□□□□□ -2.18
RAF1P04049 Y_RNA.293-201ENST00000364908 93 ntBASIC1.45□□□□□ -2.18
RAF1P04049 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNY4P28-201ENST00000365281 93 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNU6-144P-201ENST00000383951 107 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNU6-1031P-201ENST00000384773 107 ntBASIC1.45□□□□□ -2.18
RAF1P04049 MIR1278-201ENST00000408753 81 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RN7SKP200-201ENST00000410564 320 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNU6-383P-201ENST00000410864 94 ntBASIC1.45□□□□□ -2.18
RAF1P04049 Z98949.2-201ENST00000440996 144 ntBASIC1.45□□□□□ -2.18
RAF1P04049 STAG3L5P-204ENST00000443759 179 ntBASIC1.45□□□□□ -2.18
RAF1P04049 AC099513.1-201ENST00000490423 301 ntBASIC1.45□□□□□ -2.18
RAF1P04049 OR9P1P-201ENST00000496431 281 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNU4-71P-201ENST00000516258 113 ntBASIC1.45□□□□□ -2.18
RAF1P04049 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.45□□□□□ -2.18
RAF1P04049 AL591926.4-201ENST00000616895 298 ntBASIC1.45□□□□□ -2.18
RAF1P04049 AC078938.1-201ENST00000620993 318 ntBASIC1.45□□□□□ -2.18
RAF1P04049 RNY1-201ENST00000364228 113 ntBASIC1.44□□□□□ -2.18
RAF1P04049 Y_RNA.265-201ENST00000364677 108 ntBASIC1.44□□□□□ -2.18
RAF1P04049 Y_RNA.304-201ENST00000365011 112 ntBASIC1.44□□□□□ -2.18
RAF1P04049 RNU6-950P-201ENST00000384651 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms