Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 MIR3144-201ENST00000579460 79 ntBASIC2.11□□□□□ -2.07
TBC1D4O60343 MIR4308-201ENST00000580634 81 ntBASIC2.11□□□□□ -2.07
TBC1D4O60343 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TBC1D4O60343 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TBC1D4O60343 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
TBC1D4O60343 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TBC1D4O60343 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TBC1D4O60343 Y_RNA.8-201ENST00000362353 102 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 SNORA1B-201ENST00000362535 133 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 RNU6-1290P-201ENST00000362957 109 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 Y_RNA.293-201ENST00000364908 93 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 SNORA4.2-201ENST00000365313 147 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 RNU6-144P-201ENST00000383951 107 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 MIR562-201ENST00000384894 95 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 RNU6-440P-201ENST00000390882 105 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 RNA5SP212-201ENST00000391223 107 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 RNU2-7P-201ENST00000410794 178 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 RNU5E-9P-201ENST00000411164 104 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.1□□□□□ -2.07
TBC1D4O60343 RNA5SP57-201ENST00000459463 123 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
TBC1D4O60343 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 AL627230.6-201ENST00000611129 280 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 AL773524.1-201ENST00000614065 229 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 MIR8054-201ENST00000620877 86 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.1□□□□□ -2.07
TBC1D4O60343 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TBC1D4O60343 RNU4-10P-201ENST00000364383 140 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 RNU6-923P-201ENST00000364753 107 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 Y_RNA.304-201ENST00000365011 112 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 RNU6-1130P-201ENST00000365434 107 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 RNY1P5-201ENST00000383890 115 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 Y_RNA.466-201ENST00000384294 113 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 MIR518E-201ENST00000385252 88 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 Y_RNA.621-201ENST00000411065 96 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 RNU6-437P-201ENST00000459408 95 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.09□□□□□ -2.07
TBC1D4O60343 RNU6-1219P-201ENST00000516143 112 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 SNORA31.17-201ENST00000516953 127 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 AL358944.1-201ENST00000528537 144 ntBASIC2.09□□□□□ -2.07
TBC1D4O60343 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.09□□□□□ -2.07
TBC1D4O60343 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
TBC1D4O60343 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
TBC1D4O60343 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
TBC1D4O60343 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
TBC1D4O60343 RNU6-674P-201ENST00000363831 107 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 Y_RNA.240-201ENST00000364469 95 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 MIR613-201ENST00000385248 95 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TBC1D4O60343 RNU6-383P-201ENST00000410864 94 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.08□□□□□ -2.08
TBC1D4O60343 AL049830.1-201ENST00000468034 425 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.08□□□□□ -2.08
TBC1D4O60343 RNA5SP272-201ENST00000516095 111 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 AP002004.2-201ENST00000531656 154 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.08□□□□□ -2.08
TBC1D4O60343 MIR8070-201ENST00000616510 88 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
TBC1D4O60343 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TBC1D4O60343 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
TBC1D4O60343 RNU6-653P-201ENST00000363074 106 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 Y_RNA.233-201ENST00000364407 101 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 SNORA25.9-201ENST00000365087 128 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 RNU6-131P-201ENST00000391144 107 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 SNORA40.18-201ENST00000391200 128 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 HSPE1P9-201ENST00000440046 311 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
TBC1D4O60343 COX6CP14-201ENST00000469580 174 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.07□□□□□ -2.08
TBC1D4O60343 MRPS17P9-201ENST00000511924 393 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 AC100767.1-201ENST00000528178 123 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.07□□□□□ -2.08
TBC1D4O60343 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.07□□□□□ -2.08
TBC1D4O60343 SNRPGP19-201ENST00000603826 189 ntBASIC2.07□□□□□ -2.08
TBC1D4O60343 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TBC1D4O60343 Y_RNA.203-201ENST00000364106 102 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 Y_RNA.262-201ENST00000364641 102 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 RNA5SP138-201ENST00000365098 114 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 SNORD50.2-201ENST00000365465 70 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 Y_RNA.572-201ENST00000384757 98 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 MIR1278-201ENST00000408753 81 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 RNU6-735P-201ENST00000410612 107 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 RPL23AP6-201ENST00000446637 472 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.06□□□□□ -2.08
TBC1D4O60343 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 RNU2-56P-201ENST00000516826 190 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 AL096840.1-201ENST00000603287 93 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 AL359821.1-201ENST00000605519 182 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 Y_RNA.802-201ENST00000614892 130 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 U6.106-201ENST00000636360 105 ntBASIC2.06□□□□□ -2.08
TBC1D4O60343 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TBC1D4O60343 Y_RNA.24-201ENST00000362508 103 ntBASIC2.05□□□□□ -2.08
TBC1D4O60343 Y_RNA.81-201ENST00000362997 102 ntBASIC2.05□□□□□ -2.08
TBC1D4O60343 Y_RNA.116-201ENST00000363292 103 ntBASIC2.05□□□□□ -2.08
TBC1D4O60343 RNU4-41P-201ENST00000364426 143 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms