Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MIR504-201ENST00000385065 83 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 SNORA19.1-201ENST00000410656 129 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.6□□□□□ -1.99
PRICKLE3O43900 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.6□□□□□ -1.99
PRICKLE3O43900 RNU6-240P-201ENST00000516098 97 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 RNU6-693P-201ENST00000516134 107 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 Y_RNA.666-201ENST00000516187 112 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PRICKLE3O43900 MIR5197-201ENST00000583721 112 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PRICKLE3O43900 MALAT1.1-201ENST00000618249 95 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 AC134878.1-201ENST00000619901 243 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 AC025521.1-201ENST00000621624 286 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 MIR6733-201ENST00000635723 61 ntBASIC2.6□□□□□ -1.99
PRICKLE3O43900 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PRICKLE3O43900 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PRICKLE3O43900 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PRICKLE3O43900 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
PRICKLE3O43900 MIR302B-201ENST00000362188 73 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 Y_RNA.219-201ENST00000364232 113 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 MIR518F-201ENST00000384973 87 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PRICKLE3O43900 SNORD78.1-201ENST00000390866 65 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 MIR887-201ENST00000401258 79 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 SNRPGP13-201ENST00000442212 177 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.59□□□□□ -1.99
PRICKLE3O43900 AC008413.1-201ENST00000511864 177 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 RNU6-830P-201ENST00000516353 107 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 RNY4P20-201ENST00000516678 93 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 AC084364.2-201ENST00000546924 395 ntBASIC2.59□□□□□ -1.99
PRICKLE3O43900 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.59□□□□□ -1.99
PRICKLE3O43900 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
PRICKLE3O43900 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
PRICKLE3O43900 RNU1-72P-201ENST00000362976 153 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 Y_RNA.93-201ENST00000363066 109 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 RNU6-414P-201ENST00000363705 104 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 Y_RNA.242-201ENST00000364473 110 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 Y_RNA.253-201ENST00000364562 112 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 RNU6-438P-201ENST00000365561 103 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 MT-TI-201ENST00000387365 69 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 RNA5SP344-201ENST00000411081 104 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 SNRPGP10-201ENST00000432323 225 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
PRICKLE3O43900 AC109327.2-201ENST00000448339 378 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 HMGN2P18-201ENST00000450680 270 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 SNORD109B-201ENST00000458961 67 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 SNORD109A-201ENST00000459128 67 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 snoU13.26-201ENST00000459452 105 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.58□□□□□ -2
PRICKLE3O43900 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 AL590808.1-201ENST00000618696 141 ntBASIC2.58□□□□□ -2
PRICKLE3O43900 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRICKLE3O43900 RNU6-349P-201ENST00000362402 107 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 Y_RNA.342-201ENST00000365352 113 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 MIR759-201ENST00000390224 91 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 AC003685.2-201ENST00000422795 395 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.57□□□□□ -2
PRICKLE3O43900 AC104389.3-201ENST00000445629 235 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
PRICKLE3O43900 AC087685.1-201ENST00000587507 141 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.57□□□□□ -2
PRICKLE3O43900 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRICKLE3O43900 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.57□□□□□ -2
PRICKLE3O43900 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.57□□□□□ -2
PRICKLE3O43900 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.56□□□□□ -2
PRICKLE3O43900 Y_RNA.344-201ENST00000365381 112 ntBASIC2.56□□□□□ -2
PRICKLE3O43900 Y_RNA.410-201ENST00000383992 113 ntBASIC2.56□□□□□ -2
PRICKLE3O43900 Y_RNA.466-201ENST00000384294 113 ntBASIC2.56□□□□□ -2
PRICKLE3O43900 AC107297.1-201ENST00000459991 176 ntBASIC2.56□□□□□ -2
PRICKLE3O43900 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
PRICKLE3O43900 RNU6-586P-201ENST00000517265 104 ntBASIC2.56□□□□□ -2
PRICKLE3O43900 AC026421.1-201ENST00000519101 163 ntBASIC2.56□□□□□ -2
PRICKLE3O43900 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.56□□□□□ -2
PRICKLE3O43900 MIR1248-201ENST00000629190 106 ntBASIC2.56□□□□□ -2
PRICKLE3O43900 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
PRICKLE3O43900 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
PRICKLE3O43900 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.56□□□□□ -2
PRICKLE3O43900 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
PRICKLE3O43900 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRICKLE3O43900 Y_RNA.298-201ENST00000364960 107 ntBASIC2.55□□□□□ -2
PRICKLE3O43900 SNORD88.1-201ENST00000408684 91 ntBASIC2.55□□□□□ -2
PRICKLE3O43900 Y_RNA.621-201ENST00000411065 96 ntBASIC2.55□□□□□ -2
PRICKLE3O43900 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.55□□□□□ -2
PRICKLE3O43900 RNU6-1146P-201ENST00000516282 102 ntBASIC2.55□□□□□ -2
PRICKLE3O43900 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
PRICKLE3O43900 AC073413.2-201ENST00000604332 360 ntBASIC2.55□□□□□ -2
PRICKLE3O43900 AC015726.2-201ENST00000620112 122 ntBASIC2.55□□□□□ -2
PRICKLE3O43900 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRICKLE3O43900 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRICKLE3O43900 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRICKLE3O43900 AC018630.2-201ENST00000534866 2403 ntBASIC2.54□□□□□ -2
PRICKLE3O43900 RNU6-859P-201ENST00000362728 107 ntBASIC2.54□□□□□ -2
PRICKLE3O43900 RNY1P10-201ENST00000363268 113 ntBASIC2.54□□□□□ -2
PRICKLE3O43900 RNU6-690P-201ENST00000365242 106 ntBASIC2.54□□□□□ -2
PRICKLE3O43900 MIR548D2-201ENST00000384955 97 ntBASIC2.54□□□□□ -2
PRICKLE3O43900 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms