Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR490-201ENST00000384865 128 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 Y_RNA.607-201ENST00000410597 98 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.68□□□□□ -1.82
ACTN4O43707 SRIP3-201ENST00000413200 219 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 CST2P1-201ENST00000425770 87 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 AC245047.3-201ENST00000429428 127 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 CST9LP2-201ENST00000437612 320 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 AL135938.1-201ENST00000443141 297 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 AC115115.1-201ENST00000449927 248 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 RN7SL297P-201ENST00000483161 293 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 RN7SL504P-201ENST00000494496 287 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 AC114811.1-201ENST00000507207 168 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 RNA5SP33-201ENST00000516687 98 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 RNU6-667P-201ENST00000517186 102 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 RNU6-711P-201ENST00000517255 106 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.68□□□□□ -1.82
ACTN4O43707 SNORA50A-202ENST00000629536 136 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
ACTN4O43707 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.68□□□□□ -1.82
ACTN4O43707 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ACTN4O43707 GABRG2-229ENST00000641017 3628 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 RNU6-1313P-201ENST00000362622 102 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 RNA5SP295-201ENST00000362655 121 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 RNU6-509P-201ENST00000363519 107 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 RNU6-805P-201ENST00000365643 106 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 Y_RNA.430-201ENST00000384081 110 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 RNU6-424P-201ENST00000384367 105 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 MIR23B-201ENST00000384832 97 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 MIR218-2-201ENST00000385006 110 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 RNU2-63P-201ENST00000410792 194 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 SNORA84-201ENST00000459229 133 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 RNU7-45P-201ENST00000459460 63 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.67□□□□□ -1.82
ACTN4O43707 RNU6-1258P-201ENST00000516911 111 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.67□□□□□ -1.82
ACTN4O43707 MIR548AE2-201ENST00000583456 67 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 AL355297.2-201ENST00000604792 129 ntBASIC3.67□□□□□ -1.82
ACTN4O43707 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ACTN4O43707 SNORD115-2-201ENST00000362842 82 ntBASIC3.66□□□□□ -1.82
ACTN4O43707 SNORD115-20-201ENST00000365099 82 ntBASIC3.66□□□□□ -1.82
ACTN4O43707 MIR592-201ENST00000384959 97 ntBASIC3.66□□□□□ -1.82
ACTN4O43707 RPS29P4-201ENST00000414733 161 ntBASIC3.66□□□□□ -1.82
ACTN4O43707 MIR3152-201ENST00000579801 74 ntBASIC3.66□□□□□ -1.82
ACTN4O43707 MIR4276-201ENST00000584832 70 ntBASIC3.66□□□□□ -1.82
ACTN4O43707 U3.45-201ENST00000607547 219 ntBASIC3.66□□□□□ -1.82
ACTN4O43707 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ACTN4O43707 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
ACTN4O43707 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.65□□□□□ -1.82
ACTN4O43707 RNA5SP383-201ENST00000362934 120 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 SNORD114-6-201ENST00000364393 72 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 Y_RNA.470-201ENST00000384307 117 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 MIR561-201ENST00000385216 97 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 RNU6-1319P-201ENST00000390855 104 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 RNU6-747P-201ENST00000390928 104 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 RNU6-241P-201ENST00000391148 104 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 MIR889-201ENST00000401280 79 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 RNU6-177P-201ENST00000411257 104 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 TRIAP1P1-201ENST00000427062 225 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 AC069257.2-201ENST00000441819 155 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 UBL5P3-201ENST00000475112 231 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 AC092185.1-201ENST00000491371 97 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 AC108729.3-201ENST00000513484 108 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 IGLV3-17-201ENST00000519099 244 ntBASIC3.65□□□□□ -1.83
ACTN4O43707 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.65□□□□□ -1.83
ACTN4O43707 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ACTN4O43707 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.64□□□□□ -1.83
ACTN4O43707 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
ACTN4O43707 RNU6-862P-201ENST00000362804 105 ntBASIC3.64□□□□□ -1.83
ACTN4O43707 MIR200C-201ENST00000384980 68 ntBASIC3.64□□□□□ -1.83
ACTN4O43707 MIR1267-201ENST00000408723 78 ntBASIC3.64□□□□□ -1.83
ACTN4O43707 RPPH1-2P-201ENST00000516688 293 ntBASIC3.64□□□□□ -1.83
ACTN4O43707 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.64□□□□□ -1.83
ACTN4O43707 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.64□□□□□ -1.83
ACTN4O43707 MIR2682-201ENST00000580305 110 ntBASIC3.64□□□□□ -1.83
ACTN4O43707 MIR3158-1-201ENST00000583596 81 ntBASIC3.64□□□□□ -1.83
ACTN4O43707 AC103810.7-201ENST00000607821 91 ntBASIC3.64□□□□□ -1.83
ACTN4O43707 MIR376B-201ENST00000614515 100 ntBASIC3.64□□□□□ -1.83
ACTN4O43707 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.64□□□□□ -1.83
ACTN4O43707 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ACTN4O43707 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ACTN4O43707 SNORA67.7-201ENST00000516664 135 ntBASIC3.63□□□□□ -1.83
ACTN4O43707 RNU6-1116P-201ENST00000517269 99 ntBASIC3.63□□□□□ -1.83
ACTN4O43707 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.63□□□□□ -1.83
ACTN4O43707 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.63□□□□□ -1.83
ACTN4O43707 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ACTN4O43707 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ACTN4O43707 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ACTN4O43707 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ACTN4O43707 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ACTN4O43707 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.62□□□□□ -1.83
ACTN4O43707 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.62□□□□□ -1.83
ACTN4O43707 SNORA22.1-201ENST00000362701 134 ntBASIC3.62□□□□□ -1.83
ACTN4O43707 Y_RNA.99-201ENST00000363138 105 ntBASIC3.62□□□□□ -1.83
ACTN4O43707 RNU1-33P-201ENST00000364249 162 ntBASIC3.62□□□□□ -1.83
ACTN4O43707 RNA5SP139-201ENST00000364340 117 ntBASIC3.62□□□□□ -1.83
ACTN4O43707 Y_RNA.316-201ENST00000365118 111 ntBASIC3.62□□□□□ -1.83
ACTN4O43707 STAG3L5P-204ENST00000443759 179 ntBASIC3.62□□□□□ -1.83
ACTN4O43707 RNU7-181P-201ENST00000517234 74 ntBASIC3.62□□□□□ -1.83
ACTN4O43707 AC008739.3-201ENST00000603262 127 ntBASIC3.62□□□□□ -1.83
ACTN4O43707 RNU6-86P-201ENST00000606534 107 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms