Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 RN7SL75P-201ENST00000461926 281 ntBASIC3.12□□□□□ -1.91
GPC6Q9Y625 RN7SL499P-201ENST00000481141 276 ntBASIC3.12□□□□□ -1.91
GPC6Q9Y625 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.12□□□□□ -1.91
GPC6Q9Y625 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.12□□□□□ -1.91
GPC6Q9Y625 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.12□□□□□ -1.91
GPC6Q9Y625 SNORD115-40-201ENST00000606510 82 ntBASIC3.12□□□□□ -1.91
GPC6Q9Y625 AL162726.3-218ENST00000636401 95 ntBASIC3.12□□□□□ -1.91
GPC6Q9Y625 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
GPC6Q9Y625 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
GPC6Q9Y625 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GPC6Q9Y625 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC6Q9Y625 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC6Q9Y625 Y_RNA.107-201ENST00000363190 121 ntBASIC3.11□□□□□ -1.91
GPC6Q9Y625 SNORA25.6-201ENST00000364121 118 ntBASIC3.11□□□□□ -1.91
GPC6Q9Y625 SNORD17-201ENST00000390930 237 ntBASIC3.11□□□□□ -1.91
GPC6Q9Y625 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.11□□□□□ -1.91
GPC6Q9Y625 RN7SKP200-201ENST00000410564 320 ntBASIC3.11□□□□□ -1.91
GPC6Q9Y625 AC087499.4-201ENST00000448505 178 ntBASIC3.11□□□□□ -1.91
GPC6Q9Y625 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.11□□□□□ -1.91
GPC6Q9Y625 AC008739.3-201ENST00000603262 127 ntBASIC3.11□□□□□ -1.91
GPC6Q9Y625 MALAT1.1-201ENST00000618249 95 ntBASIC3.11□□□□□ -1.91
GPC6Q9Y625 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC6Q9Y625 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GPC6Q9Y625 MIR302B-201ENST00000362188 73 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 MIR208A-201ENST00000362287 71 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 RNU4-35P-201ENST00000362588 141 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 RNA5SP50-201ENST00000363731 107 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 RNA5SP173-201ENST00000364857 136 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 RNU6-1134P-201ENST00000365156 101 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC6Q9Y625 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
GPC6Q9Y625 SNORA11.4-201ENST00000408823 129 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 MIR1289-1-201ENST00000408836 144 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.1□□□□□ -1.91
GPC6Q9Y625 RN7SL601P-201ENST00000471221 293 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 AC025518.1-201ENST00000479856 347 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 RNU6-904P-201ENST00000516206 101 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
GPC6Q9Y625 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.1□□□□□ -1.91
GPC6Q9Y625 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GPC6Q9Y625 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
GPC6Q9Y625 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GPC6Q9Y625 AC104332.2-201ENST00000429959 156 ntBASIC3.09□□□□□ -1.91
GPC6Q9Y625 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC6Q9Y625 SCARNA20.6-201ENST00000517251 106 ntBASIC3.09□□□□□ -1.91
GPC6Q9Y625 DEFB131E-201ENST00000532329 154 ntBASIC3.09□□□□□ -1.91
GPC6Q9Y625 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC6Q9Y625 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.09□□□□□ -1.91
GPC6Q9Y625 MIR3922-201ENST00000585192 84 ntBASIC3.09□□□□□ -1.91
GPC6Q9Y625 AC078899.2-201ENST00000595282 212 ntBASIC3.09□□□□□ -1.91
GPC6Q9Y625 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.09□□□□□ -1.91
GPC6Q9Y625 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
GPC6Q9Y625 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.09□□□□□ -1.92
GPC6Q9Y625 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.09□□□□□ -1.92
GPC6Q9Y625 RNA5SP119-201ENST00000362715 117 ntBASIC3.08□□□□□ -1.92
GPC6Q9Y625 RNU4-36P-201ENST00000364294 144 ntBASIC3.08□□□□□ -1.92
GPC6Q9Y625 SNORA27-201ENST00000384323 126 ntBASIC3.08□□□□□ -1.92
GPC6Q9Y625 Y_RNA.531-201ENST00000384589 121 ntBASIC3.08□□□□□ -1.92
GPC6Q9Y625 AL035398.1-201ENST00000430869 322 ntBASIC3.08□□□□□ -1.92
GPC6Q9Y625 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.08□□□□□ -1.92
GPC6Q9Y625 RN7SL293P-201ENST00000481765 281 ntBASIC3.08□□□□□ -1.92
GPC6Q9Y625 RNU7-28P-201ENST00000516759 62 ntBASIC3.08□□□□□ -1.92
GPC6Q9Y625 MIR2052-201ENST00000636055 55 ntBASIC3.08□□□□□ -1.92
GPC6Q9Y625 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
GPC6Q9Y625 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
GPC6Q9Y625 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GPC6Q9Y625 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
GPC6Q9Y625 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GPC6Q9Y625 MIR494-201ENST00000349529 81 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 RNU1-70P-201ENST00000362618 164 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 RNY3P2-201ENST00000362918 102 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 Y_RNA.78-201ENST00000362970 110 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 AL627390.1-201ENST00000396055 340 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 MIR1912-201ENST00000410389 80 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 CST9LP2-201ENST00000437612 320 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 PGBD4P5-201ENST00000445958 426 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC6Q9Y625 AC107297.1-201ENST00000459991 176 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 RNU1-143P-201ENST00000516296 146 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 AC090821.2-201ENST00000523552 176 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 MIR3169-201ENST00000578032 83 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 MIR3683-201ENST00000580847 82 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 U1.23-201ENST00000610293 146 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 uc_338.1-201ENST00000612113 180 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 RNU1-68P-201ENST00000615382 146 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 MIR8054-201ENST00000620877 86 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 U1.39-201ENST00000621562 146 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 AL035425.3-201ENST00000564206 4996 ntBASIC3.07□□□□□ -1.92
GPC6Q9Y625 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GPC6Q9Y625 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GPC6Q9Y625 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
GPC6Q9Y625 AC092435.3-201ENST00000565538 3654 ntBASIC3.06□□□□□ -1.92
GPC6Q9Y625 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
GPC6Q9Y625 Y_RNA.155-201ENST00000363632 101 ntBASIC3.06□□□□□ -1.92
GPC6Q9Y625 SNORA11.1-201ENST00000408133 129 ntBASIC3.06□□□□□ -1.92
GPC6Q9Y625 RNA5SP229-201ENST00000410809 99 ntBASIC3.06□□□□□ -1.92
GPC6Q9Y625 AL022718.1-201ENST00000412004 84 ntBASIC3.06□□□□□ -1.92
GPC6Q9Y625 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.06□□□□□ -1.92
GPC6Q9Y625 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.06□□□□□ -1.92
GPC6Q9Y625 RNU7-181P-201ENST00000517234 74 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms