Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 Y_RNA.322-201ENST00000365151 102 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 RNU6-211P-201ENST00000384047 107 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 MIR522-201ENST00000385071 87 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 MIR660-201ENST00000385235 97 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 U8.16-201ENST00000391279 133 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 AL603910.2-201ENST00000407268 136 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 MIR548H3-201ENST00000408771 118 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 RNU2-38P-201ENST00000410856 79 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 Y_RNA.650-201ENST00000459002 102 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 RPL39P38-201ENST00000467018 153 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 AC005908.1-201ENST00000468701 347 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 Y_RNA.777-201ENST00000516982 102 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 Y_RNA.771-201ENST00000598668 102 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 AL008718.3-201ENST00000610217 321 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 Y_RNA.789-201ENST00000622480 102 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 SNORD3E-202ENST00000627253 216 ntBASIC1.59□□□□□ -2.15
LSM4Q9Y4Z0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.59□□□□□ -2.16
LSM4Q9Y4Z0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 ICE2P2-201ENST00000483823 2787 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 SNORD68-201ENST00000363214 84 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.117-201ENST00000363294 101 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 RNU6-969P-201ENST00000383900 105 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 SNORD2.1-201ENST00000458762 69 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 RN7SL274P-201ENST00000492268 272 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 MIR5688-201ENST00000580619 83 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 MIR4282-201ENST00000583613 67 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 uc_338.20-201ENST00000621563 178 ntBASIC1.58□□□□□ -2.16
LSM4Q9Y4Z0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.122-201ENST00000363331 96 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 RNU6-1209P-201ENST00000363655 107 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.416-201ENST00000384014 113 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.478-201ENST00000384358 107 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 AL139156.1-201ENST00000412785 841 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 SNRPGP10-201ENST00000432323 225 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 AC004817.2-201ENST00000561794 651 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 BX284668.6-201ENST00000606899 438 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 AC027279.3-201ENST00000625055 122 ntBASIC1.57□□□□□ -2.16
LSM4Q9Y4Z0 AC068700.1-201ENST00000565862 3754 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 SNORD33-201ENST00000362761 85 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.796-201ENST00000364268 102 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.799-201ENST00000364992 102 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.350-201ENST00000365409 98 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 RNU6-574P-201ENST00000384265 107 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 MIR513A1-201ENST00000385138 129 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.590-201ENST00000410140 107 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 RNU2-2P-201ENST00000410396 191 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 MLLT10P1-201ENST00000418346 262 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 RNU7-12P-201ENST00000516030 62 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 SUMO2P16-201ENST00000519475 264 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 MIR5089-201ENST00000580047 84 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
LSM4Q9Y4Z0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 RNU6-833P-201ENST00000363486 107 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.277-201ENST00000364754 102 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 RNU6-338P-201ENST00000383888 105 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 MIR526A2-201ENST00000390198 65 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 RNU6-131P-201ENST00000391144 107 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 RNU6-651P-201ENST00000411040 105 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 CYCTP-201ENST00000504253 315 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 RNA5SP182-201ENST00000516064 82 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 MIR4643-201ENST00000577473 78 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 AC087685.1-201ENST00000587507 141 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 AC120024.3-201ENST00000603167 156 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 AP000942.3-201ENST00000603702 160 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 MIR6845-201ENST00000613182 61 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 JPX_2.1-201ENST00000614161 69 ntBASIC1.55□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.238-201ENST00000364441 102 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.293-201ENST00000364908 93 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 RNA5SP496-201ENST00000391240 109 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 SNORD58.1-201ENST00000391313 66 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 AC019129.1-201ENST00000403786 261 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 RNU2-40P-201ENST00000410833 196 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 CYCSP49-201ENST00000420810 319 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.679-201ENST00000516416 91 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 MIR4724-201ENST00000579485 89 ntBASIC1.54□□□□□ -2.16
LSM4Q9Y4Z0 Y_RNA.802-201ENST00000614892 130 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms