Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 MIR4448-201ENST00000584360 86 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 AC104465.1-201ENST00000611365 139 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
R3HCC1Q9Y3T6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 ZNF702P-202ENST00000434269 1966 ntBASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 RNA5SP138-201ENST00000365098 114 ntBASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 RNU6-1062P-201ENST00000383908 107 ntBASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 Y_RNA.441-201ENST00000384123 112 ntBASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 Y_RNA.464-201ENST00000384282 110 ntBASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 MIR15B-201ENST00000385045 98 ntBASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 RNU2-7P-201ENST00000410794 178 ntBASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 OR9P1P-201ENST00000496431 281 ntBASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
R3HCC1Q9Y3T6 SNORD45.3-201ENST00000363836 72 ntBASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 RNU6-728P-201ENST00000365375 104 ntBASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 RNU6-484P-201ENST00000384016 107 ntBASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 SNORD77.4-201ENST00000516158 81 ntBASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 RNU7-149P-201ENST00000516739 59 ntBASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 SNORA31.17-201ENST00000516953 127 ntBASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 RNU6-255P-201ENST00000516957 105 ntBASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 AC091544.4-201ENST00000555268 342 ntBASIC2.57□□□□□ -2
R3HCC1Q9Y3T6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 RNA5SP37-201ENST00000365420 130 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 RNU6-804P-201ENST00000384286 107 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 RNA5SP482-201ENST00000391269 118 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 RNU6-394P-201ENST00000410735 107 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 FTH1P12-201ENST00000432137 551 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 MIR4431-201ENST00000579990 94 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 MIR4762-201ENST00000585261 75 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 AC021753.1-201ENST00000635724 168 ntBASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.56□□□□□ -2
R3HCC1Q9Y3T6 SNORD72-201ENST00000390994 80 ntBASIC2.55□□□□□ -2
R3HCC1Q9Y3T6 RNU6-131P-201ENST00000391144 107 ntBASIC2.55□□□□□ -2
R3HCC1Q9Y3T6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.55□□□□□ -2
R3HCC1Q9Y3T6 AC023449.1-201ENST00000454464 154 ntBASIC2.55□□□□□ -2
R3HCC1Q9Y3T6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.55□□□□□ -2
R3HCC1Q9Y3T6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
R3HCC1Q9Y3T6 RNU7-28P-201ENST00000516759 62 ntBASIC2.55□□□□□ -2
R3HCC1Q9Y3T6 RNU6-1212P-201ENST00000517023 104 ntBASIC2.55□□□□□ -2
R3HCC1Q9Y3T6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 RNU4-84P-201ENST00000364200 139 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 U8.5-201ENST00000364528 136 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 Y_RNA.272-201ENST00000364696 102 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 SNORD50B-201ENST00000364995 70 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 RN7SKP200-201ENST00000410564 320 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 MRPS17P9-201ENST00000511924 393 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 MIR3144-201ENST00000579460 79 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 AC008507.4-201ENST00000585464 127 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 Pinc.1-201ENST00000616452 154 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 MIR203B-201ENST00000636080 86 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
R3HCC1Q9Y3T6 AL596028.1-201ENST00000326971 197 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 MIRLET7C-201ENST00000362160 84 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 Y_RNA.8-201ENST00000362353 102 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 RNU4-43P-201ENST00000410628 137 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 RNU4-53P-201ENST00000410828 140 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 RNA5SP364-201ENST00000516938 78 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 RNU6-1116P-201ENST00000517269 99 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 SNORD53-201ENST00000579969 78 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 ZNF658B-202ENST00000615961 3375 ntBASIC2.53□□□□□ -2
R3HCC1Q9Y3T6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 RNU6-1138P-201ENST00000365359 106 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 RNU6-643P-201ENST00000384018 107 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 Y_RNA.486-201ENST00000384398 107 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 RNU6-1031P-201ENST00000384773 107 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 RNU2-55P-201ENST00000411146 174 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 snoU13.27-201ENST00000459278 104 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 RNA5SP57-201ENST00000459463 123 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 MTND5P41-201ENST00000517498 206 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 AC078899.2-201ENST00000595282 212 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 SNORA28-201ENST00000606769 126 ntBASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
R3HCC1Q9Y3T6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
R3HCC1Q9Y3T6 Y_RNA.91-201ENST00000363042 107 ntBASIC2.51□□□□□ -2.01
R3HCC1Q9Y3T6 Y_RNA.170-201ENST00000363746 110 ntBASIC2.51□□□□□ -2.01
R3HCC1Q9Y3T6 RNU6-1130P-201ENST00000365434 107 ntBASIC2.51□□□□□ -2.01
R3HCC1Q9Y3T6 Y_RNA.357-201ENST00000365487 109 ntBASIC2.51□□□□□ -2.01
R3HCC1Q9Y3T6 Y_RNA.398-201ENST00000383952 99 ntBASIC2.51□□□□□ -2.01
R3HCC1Q9Y3T6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms