Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 STAG3L5P-204ENST00000443759 179 ntBASIC2.69□□□□□ -1.98
UBP1Q9NZI7 HMGN2P32-201ENST00000444648 269 ntBASIC2.69□□□□□ -1.98
UBP1Q9NZI7 AC131055.1-201ENST00000584626 316 ntBASIC2.69□□□□□ -1.98
UBP1Q9NZI7 MIR6852-201ENST00000621699 66 ntBASIC2.69□□□□□ -1.98
UBP1Q9NZI7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.69□□□□□ -1.98
UBP1Q9NZI7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
UBP1Q9NZI7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
UBP1Q9NZI7 RNU6-888P-201ENST00000363010 101 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 SNORD50B-201ENST00000364995 70 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 Y_RNA.336-201ENST00000365307 109 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 MIR520A-201ENST00000384862 85 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 MIR624-201ENST00000385217 97 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 RNU6-460P-201ENST00000391158 108 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 RNA5SP127-201ENST00000411051 133 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.68□□□□□ -1.98
UBP1Q9NZI7 SNRPGP13-201ENST00000442212 177 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 RNVU1-2-201ENST00000516326 135 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 RNU6-479P-201ENST00000516348 105 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 SNORA18.4-201ENST00000516440 124 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 AC007751.1-201ENST00000529260 376 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 U7.2-201ENST00000607576 63 ntBASIC2.68□□□□□ -1.98
UBP1Q9NZI7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBP1Q9NZI7 SNORA80A-201ENST00000363922 136 ntBASIC2.67□□□□□ -1.98
UBP1Q9NZI7 RNU6-22P-201ENST00000384355 107 ntBASIC2.67□□□□□ -1.98
UBP1Q9NZI7 AL034345.1-201ENST00000407768 123 ntBASIC2.67□□□□□ -1.98
UBP1Q9NZI7 SUB1P4-201ENST00000566062 339 ntBASIC2.67□□□□□ -1.98
UBP1Q9NZI7 MIR4529-201ENST00000578110 78 ntBASIC2.67□□□□□ -1.98
UBP1Q9NZI7 ELOCP29-201ENST00000588193 334 ntBASIC2.67□□□□□ -1.98
UBP1Q9NZI7 AC006441.5-201ENST00000612680 209 ntBASIC2.67□□□□□ -1.98
UBP1Q9NZI7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
UBP1Q9NZI7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBP1Q9NZI7 Y_RNA.120-201ENST00000363304 110 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 RNU6-1292P-201ENST00000383856 107 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 SNORD61-201ENST00000384252 73 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 RNA5SP501-201ENST00000410990 112 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 SNORD109B-201ENST00000458961 67 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 SNORD109A-201ENST00000459128 67 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 SNORA31.10-201ENST00000516482 106 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 SNORD45.4-201ENST00000516629 73 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 RNU6-826P-201ENST00000516827 104 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.66□□□□□ -1.98
UBP1Q9NZI7 MIR7106-201ENST00000612419 65 ntBASIC2.66□□□□□ -1.98
UBP1Q9NZI7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.66□□□□□ -1.98
UBP1Q9NZI7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
UBP1Q9NZI7 RNU6-1336P-201ENST00000383886 109 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 RNU2-51P-201ENST00000410708 197 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 AC007064.1-201ENST00000412238 351 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 AC008267.6-201ENST00000441664 139 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 RN7SL499P-201ENST00000481141 276 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 CYCTP-201ENST00000504253 315 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.65□□□□□ -1.99
UBP1Q9NZI7 RNU6-693P-201ENST00000516134 107 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 Y_RNA.666-201ENST00000516187 112 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 SNORA31.25-201ENST00000517242 134 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 AC011603.4-201ENST00000611325 277 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 AC027279.3-201ENST00000625055 122 ntBASIC2.65□□□□□ -1.99
UBP1Q9NZI7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.65□□□□□ -1.99
UBP1Q9NZI7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.65□□□□□ -1.99
UBP1Q9NZI7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
UBP1Q9NZI7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
UBP1Q9NZI7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UBP1Q9NZI7 SNORA3A-201ENST00000364113 130 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 RNU6-915P-201ENST00000364943 103 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 MIR9-1-201ENST00000385198 89 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 RNU2-7P-201ENST00000410794 178 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 RNA5SP481-201ENST00000516814 122 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 RNU6-971P-201ENST00000516920 106 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 RNU6-1270P-201ENST00000517128 108 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 AC078899.2-201ENST00000595282 212 ntBASIC2.64□□□□□ -1.99
UBP1Q9NZI7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
UBP1Q9NZI7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UBP1Q9NZI7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UBP1Q9NZI7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
UBP1Q9NZI7 RNY1P11-201ENST00000363759 113 ntBASIC2.63□□□□□ -1.99
UBP1Q9NZI7 SNORA5B-201ENST00000363786 132 ntBASIC2.63□□□□□ -1.99
UBP1Q9NZI7 SNORD18B-201ENST00000365659 72 ntBASIC2.63□□□□□ -1.99
UBP1Q9NZI7 AL158823.1-201ENST00000418441 478 ntBASIC2.63□□□□□ -1.99
UBP1Q9NZI7 CYCSP49-201ENST00000420810 319 ntBASIC2.63□□□□□ -1.99
UBP1Q9NZI7 RNU6-313P-201ENST00000516317 112 ntBASIC2.63□□□□□ -1.99
UBP1Q9NZI7 RNU1-104P-201ENST00000517280 175 ntBASIC2.63□□□□□ -1.99
UBP1Q9NZI7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
UBP1Q9NZI7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.62□□□□□ -1.99
UBP1Q9NZI7 RNU6-112P-201ENST00000363599 104 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
UBP1Q9NZI7 RNA5SP450-201ENST00000411206 102 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 SNRPGP14-201ENST00000435400 219 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 HSPE1P9-201ENST00000440046 311 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.62□□□□□ -1.99
UBP1Q9NZI7 RNU6-1211P-201ENST00000459179 105 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 UBE2DNL-203ENST00000474922 222 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 AC096725.1-201ENST00000514266 313 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
UBP1Q9NZI7 RNU7-193P-201ENST00000516723 65 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 MIR4319-201ENST00000577285 85 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 Y_RNA.757-201ENST00000578934 114 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 MIR3129-201ENST00000581095 76 ntBASIC2.62□□□□□ -1.99
UBP1Q9NZI7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
UBP1Q9NZI7 RNU6-859P-201ENST00000362728 107 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms