Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SEC61A2Q9H9S3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-888P-201ENST00000363010 101 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 SNORD68-201ENST00000363214 84 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 SNORA5B-201ENST00000363786 132 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 MIR548A2-201ENST00000384956 97 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 MIRLET7F2-201ENST00000385277 83 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 MIR802-201ENST00000390235 94 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 AL138827.1-201ENST00000402666 306 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 AC003685.2-201ENST00000422795 395 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 RNA5SP356-201ENST00000515972 94 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 RNA5SP236-201ENST00000516169 116 ntBASIC2.41□□□□□ -2.02
SEC61A2Q9H9S3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SEC61A2Q9H9S3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
SEC61A2Q9H9S3 SNORD77.3-201ENST00000391113 65 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 MIR1262-201ENST00000408276 93 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 RNA5SP89-201ENST00000410300 108 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 HMGN2P35-201ENST00000412164 270 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 AL353689.1-201ENST00000438895 199 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 SNRPGP13-201ENST00000442212 177 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 AC108938.1-201ENST00000451204 136 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 AL163195.1-201ENST00000496941 348 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 MIR4319-201ENST00000577285 85 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 MIR376A2-201ENST00000636782 80 ntBASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SEC61A2Q9H9S3 MIR450A1-201ENST00000362262 91 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 Y_RNA.43-201ENST00000362670 111 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 RNU6-862P-201ENST00000362804 105 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 SNORD24-201ENST00000383884 75 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 RNU6-880P-201ENST00000384526 107 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 Y_RNA.528-201ENST00000384575 108 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 MIR522-201ENST00000385071 87 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 SRIP3-201ENST00000413200 219 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 RNU6-168P-201ENST00000516189 101 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.39□□□□□ -2.03
SEC61A2Q9H9S3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 RNU6-1255P-201ENST00000363434 112 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 Y_RNA.366-201ENST00000365540 102 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 MIR518F-201ENST00000384973 87 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 RNU11-5P-201ENST00000391216 129 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 SNORA31.15-201ENST00000516771 132 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 AC092435.3-201ENST00000565538 3654 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 MIR4635-201ENST00000583759 79 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 uc_338.28-201ENST00000612082 187 ntBASIC2.38□□□□□ -2.03
SEC61A2Q9H9S3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 SNORD115-3-201ENST00000363100 82 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 DEFA7P-201ENST00000382676 285 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 RNU6-160P-201ENST00000384591 107 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 MIR634-201ENST00000385208 97 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 CALM2P4-201ENST00000430810 426 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 FTH1P12-201ENST00000432137 551 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 AC009238.1-201ENST00000442165 424 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 UBBP3-201ENST00000445497 241 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 AC009237.6-201ENST00000446969 424 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 SNORD109B-201ENST00000458961 67 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 SNORD109A-201ENST00000459128 67 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 AP002004.2-201ENST00000531656 154 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 ELOCP29-201ENST00000588193 334 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 AL353149.1-201ENST00000610667 244 ntBASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
SEC61A2Q9H9S3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 AC062016.1-201ENST00000355719 319 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 RNA5SP210-201ENST00000391034 120 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 MIR548O-201ENST00000408583 114 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 RNA5SP21-201ENST00000410917 96 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 RNA5SP492-201ENST00000411330 114 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 SCARNA15-202ENST00000516881 127 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 AL358944.1-201ENST00000528537 144 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 AC091544.4-201ENST00000555268 342 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 AL137067.1-201ENST00000615933 120 ntBASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SEC61A2Q9H9S3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms