Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 SNORA4.2-201ENST00000365313 147 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-497P-201ENST00000365316 104 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNA5SP467-201ENST00000391274 118 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-938P-201ENST00000411285 103 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 AL445646.1-201ENST00000431784 216 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 AC099677.2-201ENST00000436385 175 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 AL353689.1-201ENST00000438895 199 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNA5SP367-201ENST00000516557 118 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 MIR5680-201ENST00000577577 84 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 MIR5195-201ENST00000583555 115 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 AC091564.4-201ENST00000533934 2194 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 SNORA1B-201ENST00000362535 133 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.244-201ENST00000364484 109 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 SNORA14A-201ENST00000364773 135 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-1276P-201ENST00000365372 104 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-442P-201ENST00000383968 104 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.531-201ENST00000384589 121 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-644P-201ENST00000391155 98 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNA5SP492-201ENST00000411330 114 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RN7SL504P-201ENST00000494496 287 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-991P-201ENST00000516168 107 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 AC002984.1-201ENST00000591692 448 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 YPEL5P2-201ENST00000605553 359 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 U7.3-201ENST00000616123 62 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 U6.108-201ENST00000637764 58 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.10-201ENST00000362371 110 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-268P-201ENST00000364174 107 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-242P-201ENST00000384359 107 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 AC004941.2-201ENST00000427009 228 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 SNRPGP14-201ENST00000435400 219 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-162P-201ENST00000516228 103 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-795P-201ENST00000516323 103 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 HSPE1P19-201ENST00000603327 295 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 AC012531.4-201ENST00000616509 177 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 AC087741.2-201ENST00000619415 172 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 AC091932.4-201ENST00000623386 200 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 MIR622-201ENST00000638396 96 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 GABRG2-229ENST00000641017 3628 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 SNORD14E-201ENST00000364009 85 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 SNORA38.1-201ENST00000364172 131 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.351-201ENST00000365436 96 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 SNORA9-201ENST00000384215 133 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.507-201ENST00000384500 99 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 AC096949.1-201ENST00000412047 152 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 AL049830.1-201ENST00000468034 425 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 SNORA70.24-201ENST00000517233 118 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-170P-201ENST00000362832 104 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RNU4-16P-201ENST00000364737 141 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-787P-201ENST00000384032 107 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR491-201ENST00000384877 84 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 SNORA18.7-201ENST00000516910 131 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RN7SKP57-201ENST00000517248 293 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 AP002004.2-201ENST00000531656 154 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR4694-201ENST00000578534 80 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR3618-201ENST00000580330 88 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR3200-201ENST00000580767 85 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR1255B1-201ENST00000636325 63 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
NUCKS1Q9H1E3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
NUCKS1Q9H1E3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 SNORD68-201ENST00000363214 84 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-675P-201ENST00000384236 104 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 MIR577-201ENST00000385196 96 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 AL451046.2-201ENST00000403074 277 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU7-80P-201ENST00000459562 61 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RN7SL633P-201ENST00000488974 297 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 AC091826.1-201ENST00000514065 313 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-521P-201ENST00000516663 105 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 AP003484.1-201ENST00000530974 250 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 MIR338-201ENST00000636369 67 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms