Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL049830.1-201ENST00000468034 425 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 RNU7-200P-201ENST00000516105 62 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 RNA5SP82-201ENST00000516707 92 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 Y_RNA.703-201ENST00000516846 111 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 MTND5P41-201ENST00000517498 206 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 AL049861.1-201ENST00000603130 150 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 uc_338.4-201ENST00000616635 176 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 RNY1P5-201ENST00000383890 115 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-449P-201ENST00000383914 107 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 HMGN2P39-201ENST00000398005 273 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 MIR1283-2-201ENST00000408621 87 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 HMGN2P3-201ENST00000433603 273 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 HMGN2P5-201ENST00000436882 273 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 HMGN1P7-201ENST00000491722 313 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 RNU7-121P-201ENST00000516604 62 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 AC084364.2-201ENST00000546924 395 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 JPX_2.1-201ENST00000614161 69 ntBASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.13□□□□□ -2.07
AMBRA1Q9C0C7 MIR597-201ENST00000384968 97 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 RNU4-43P-201ENST00000410628 137 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 RNU4-61P-201ENST00000411243 107 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 AC006461.1-201ENST00000412637 326 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 AC234781.5-201ENST00000508429 271 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 AP002004.2-201ENST00000531656 154 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 AL353997.5-201ENST00000618886 171 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
AMBRA1Q9C0C7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 Y_RNA.337-201ENST00000365312 102 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-1130P-201ENST00000365434 107 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 SNORD116-18-201ENST00000383961 92 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 RNA5SP465-201ENST00000391195 109 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 RN7SKP223-201ENST00000410582 62 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 AL603825.1-201ENST00000438481 80 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 SNORD11-201ENST00000459124 84 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 AC107027.2-201ENST00000512197 115 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-346P-201ENST00000516288 111 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-1299P-201ENST00000516316 100 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 MIR5094-201ENST00000578766 85 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 AC022217.4-201ENST00000604389 163 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 SNORD14A-201ENST00000606526 91 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 AC245884.12-201ENST00000615364 59 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 MTND1P7-201ENST00000632801 297 ntBASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
AMBRA1Q9C0C7 SNORA1B-201ENST00000362535 133 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 SNORD45.3-201ENST00000363836 72 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-643P-201ENST00000384018 107 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-187P-201ENST00000384139 106 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 MIR144-201ENST00000384886 86 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 SNORA79-201ENST00000408376 140 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 SNRPGP10-201ENST00000432323 225 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 AC069114.2-201ENST00000604699 304 ntBASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
AMBRA1Q9C0C7 MIR126-201ENST00000362291 85 ntBASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 SNORD77.4-201ENST00000516158 81 ntBASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 Pinc.1-201ENST00000616452 154 ntBASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 MIR6873-201ENST00000622788 63 ntBASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
AMBRA1Q9C0C7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
AMBRA1Q9C0C7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
AMBRA1Q9C0C7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 RNA5SP289-201ENST00000362332 137 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 RNU6-151P-201ENST00000364158 107 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.400-201ENST00000383963 111 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 Y_RNA.432-201ENST00000384087 111 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 RNA5SP109-201ENST00000391010 116 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 MIR1289-2-201ENST00000408360 111 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 MLLT10P1-201ENST00000418346 262 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 AC245047.3-201ENST00000429428 127 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 AL606517.2-201ENST00000442855 241 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 RPS27P1-201ENST00000450552 247 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 OR9P1P-201ENST00000496431 281 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 RNVU1-2-201ENST00000516326 135 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 RNU7-149P-201ENST00000516739 59 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 RNU2-56P-201ENST00000516826 190 ntBASIC2.08□□□□□ -2.08
AMBRA1Q9C0C7 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms