Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR95-201ENST00000385072 81 ntBASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 RNA5SP467-201ENST00000391274 118 ntBASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 RNU6-762P-201ENST00000517107 102 ntBASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 RNU7-128P-201ENST00000517247 62 ntBASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 AC068339.1-201ENST00000526965 141 ntBASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 AL161431.1-201ENST00000618966 4205 ntBASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SSBP3Q9BWW4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 RNU6-442P-201ENST00000383968 104 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 MIR522-201ENST00000385071 87 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 RNA5SP323-201ENST00000391094 133 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 U8.17-201ENST00000391292 132 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 MIR548O-201ENST00000408583 114 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 RNU2-63P-201ENST00000410792 194 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 RNU7-94P-201ENST00000459576 63 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 AL049873.1-201ENST00000480540 376 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 SCARNA13-201ENST00000516672 275 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 SNORA48.11-201ENST00000517015 89 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 AC091544.4-201ENST00000555268 342 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 AL356280.1-201ENST00000603614 379 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 AC021443.1-201ENST00000604478 211 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 Y_RNA.818-201ENST00000618813 71 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 MIR376A2-201ENST00000636782 80 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 AL596211.1-201ENST00000569873 2277 ntBASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.41□□□□□ -2.02
SSBP3Q9BWW4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SSBP3Q9BWW4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SSBP3Q9BWW4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 RNU1-23P-201ENST00000363361 144 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 SNORA80A-201ENST00000363922 136 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 SNORD115-28-201ENST00000363931 81 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 SNORD14E-201ENST00000364009 85 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 MIR590-201ENST00000385008 97 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 AL353689.1-201ENST00000438895 199 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 AP004217.1-201ENST00000480579 346 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 SEM1P1-201ENST00000506694 209 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 AP002004.2-201ENST00000531656 154 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 MIR4778-201ENST00000577635 80 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 MIR338-201ENST00000636369 67 ntBASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSBP3Q9BWW4 AL355596.1-201ENST00000565399 3996 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 MIR340-201ENST00000362125 95 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 RNU6-349P-201ENST00000362402 107 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 SNORD68-201ENST00000363214 84 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 SNORA5B-201ENST00000363786 132 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 RNU1-133P-201ENST00000364867 167 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 AC099677.2-201ENST00000436385 175 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 RN7SL499P-201ENST00000481141 276 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 RNU6-109P-201ENST00000516364 107 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 RNU6-184P-201ENST00000516514 107 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 RNA5SP367-201ENST00000516557 118 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 SUMO2P16-201ENST00000519475 264 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 AC084364.2-201ENST00000546924 395 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 AC006441.5-201ENST00000612680 209 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 AL442128.1-201ENST00000615151 90 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SSBP3Q9BWW4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.298-201ENST00000364960 107 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 MIR488-201ENST00000365739 83 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 RNY1P6-201ENST00000384193 109 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 SNORA8-201ENST00000384574 139 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 MIR515-2-201ENST00000384883 83 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 MIR515-1-201ENST00000384884 83 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 MIR561-201ENST00000385216 97 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 AC087499.2-201ENST00000432861 149 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 AL135938.1-201ENST00000443141 297 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 RNU7-164P-201ENST00000459221 62 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 RPS29P12-201ENST00000460178 152 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 RNU6-830P-201ENST00000516353 107 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 AC141557.1-201ENST00000540982 400 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 ELOCP29-201ENST00000588193 334 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms