Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MIR6820-201ENST00000611508 62 ntBASIC2.79□□□□□ -1.96
SSBP4Q9BWG4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RNU6-862P-201ENST00000362804 105 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 SNORD115-37-201ENST00000363768 82 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RNU6-1229P-201ENST00000364295 107 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RNU6-1163P-201ENST00000364516 107 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 SNORA1.2-201ENST00000365189 134 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RNU6-524P-201ENST00000384270 107 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 Y_RNA.545-201ENST00000384652 105 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RNU1-101P-201ENST00000391171 127 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RN7SKP192-201ENST00000411291 327 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 AL445685.2-201ENST00000422551 342 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 AL161932.1-201ENST00000437408 146 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 STAG3L5P-204ENST00000443759 179 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RN7SL442P-201ENST00000473804 320 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 AC093729.1-201ENST00000513074 128 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RNU7-53P-201ENST00000516705 60 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 AC007536.1-201ENST00000533382 349 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 RN7SL600P-201ENST00000581811 299 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 AC103810.6-201ENST00000606708 136 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 AC027279.3-201ENST00000625055 122 ntBASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSBP4Q9BWG4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 MIR30E-201ENST00000362104 92 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 SNORD114-6-201ENST00000364393 72 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 SNORD115-27-201ENST00000364430 82 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 RNU6-160P-201ENST00000384591 107 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 U8.11-201ENST00000384699 133 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 MIR592-201ENST00000384959 97 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 MIR519C-201ENST00000385053 87 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 MIR887-201ENST00000401258 79 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 RPS29P28-201ENST00000446439 141 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 RPS29P33-201ENST00000456717 146 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 RNU7-67P-201ENST00000459003 62 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 U8.18-201ENST00000459285 133 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 RNU7-2P-201ENST00000516096 62 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 RNA5SP164-201ENST00000516533 110 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 RNU6-711P-201ENST00000517255 106 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 SNORA28-201ENST00000606769 126 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 U7.4-201ENST00000614961 63 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 AC114781.5-201ENST00000615297 108 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 MIR6841-201ENST00000637129 72 ntBASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSBP4Q9BWG4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 RNA5SP139-201ENST00000364340 117 ntBASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 RN7SKP123-201ENST00000410732 291 ntBASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 UBL5P1-201ENST00000507979 193 ntBASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 RNU6-958P-201ENST00000516995 106 ntBASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 AP000346.3-201ENST00000622821 210 ntBASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSBP4Q9BWG4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 RNA5SP424-201ENST00000390988 115 ntBASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 RPL31P63-201ENST00000422565 375 ntBASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 AL606517.2-201ENST00000442855 241 ntBASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 SNORA62.6-201ENST00000606322 83 ntBASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 SNORD3E-202ENST00000627253 216 ntBASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
SSBP4Q9BWG4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 Y_RNA.567-201ENST00000384736 106 ntBASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 AC023141.11-201ENST00000508864 202 ntBASIC2.74□□□□□ -1.97
SSBP4Q9BWG4 MIR5096-201ENST00000583713 70 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms