Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-23P-201ENST00000363283 107 ntBASIC3.44□□□□□ -1.86
USB1Q9BQ65 SNORA1.1-201ENST00000364671 133 ntBASIC3.44□□□□□ -1.86
USB1Q9BQ65 MIR184-201ENST00000384962 84 ntBASIC3.44□□□□□ -1.86
USB1Q9BQ65 MIR1270-201ENST00000459320 83 ntBASIC3.44□□□□□ -1.86
USB1Q9BQ65 AC026402.1-201ENST00000513642 170 ntBASIC3.44□□□□□ -1.86
USB1Q9BQ65 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.44□□□□□ -1.86
USB1Q9BQ65 AC019288.1-201ENST00000557918 224 ntBASIC3.44□□□□□ -1.86
USB1Q9BQ65 AC006130.2-201ENST00000586202 326 ntBASIC3.44□□□□□ -1.86
USB1Q9BQ65 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.44□□□□□ -1.86
USB1Q9BQ65 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USB1Q9BQ65 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.44□□□□□ -1.86
USB1Q9BQ65 SNORA1.2-201ENST00000365189 134 ntBASIC3.43□□□□□ -1.86
USB1Q9BQ65 SNORD58A-201ENST00000383875 65 ntBASIC3.43□□□□□ -1.86
USB1Q9BQ65 MIR199A2-201ENST00000385289 110 ntBASIC3.43□□□□□ -1.86
USB1Q9BQ65 RN7SL323P-201ENST00000494712 295 ntBASIC3.43□□□□□ -1.86
USB1Q9BQ65 SNORA70.19-201ENST00000516717 90 ntBASIC3.43□□□□□ -1.86
USB1Q9BQ65 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
USB1Q9BQ65 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
USB1Q9BQ65 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USB1Q9BQ65 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
USB1Q9BQ65 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.42□□□□□ -1.86
USB1Q9BQ65 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USB1Q9BQ65 RNA5SP399-201ENST00000364003 117 ntBASIC3.42□□□□□ -1.86
USB1Q9BQ65 SNORA62.3-201ENST00000365110 153 ntBASIC3.42□□□□□ -1.86
USB1Q9BQ65 SNORA70.7-201ENST00000384159 133 ntBASIC3.42□□□□□ -1.86
USB1Q9BQ65 MIR200C-201ENST00000384980 68 ntBASIC3.42□□□□□ -1.86
USB1Q9BQ65 U8.15-201ENST00000390947 134 ntBASIC3.42□□□□□ -1.86
USB1Q9BQ65 Y_RNA.611-201ENST00000410682 108 ntBASIC3.42□□□□□ -1.86
USB1Q9BQ65 AC108729.3-201ENST00000513484 108 ntBASIC3.42□□□□□ -1.86
USB1Q9BQ65 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.42□□□□□ -1.86
USB1Q9BQ65 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.42□□□□□ -1.86
USB1Q9BQ65 MIR6841-201ENST00000637129 72 ntBASIC3.42□□□□□ -1.86
USB1Q9BQ65 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.42□□□□□ -1.86
USB1Q9BQ65 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USB1Q9BQ65 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USB1Q9BQ65 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
USB1Q9BQ65 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USB1Q9BQ65 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USB1Q9BQ65 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USB1Q9BQ65 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
USB1Q9BQ65 SNORD21-201ENST00000383953 95 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 MIR134-201ENST00000385258 73 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 CYCSP19-201ENST00000411715 316 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 RPS29P7-201ENST00000439662 171 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 SNORA31.10-201ENST00000516482 106 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 RNU7-53P-201ENST00000516705 60 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 RNU6-958P-201ENST00000516995 106 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 AC008011.1-201ENST00000545989 227 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 AC034105.4-201ENST00000568304 277 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 ELOCP29-201ENST00000588193 334 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.41□□□□□ -1.86
USB1Q9BQ65 RNVU1-4-201ENST00000612985 164 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 AL591424.2-201ENST00000617023 128 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 MIR4662A-201ENST00000637499 67 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 AL355596.1-201ENST00000565399 3996 ntBASIC3.41□□□□□ -1.86
USB1Q9BQ65 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
USB1Q9BQ65 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USB1Q9BQ65 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.41□□□□□ -1.86
USB1Q9BQ65 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
USB1Q9BQ65 RNU6-833P-201ENST00000363486 107 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 Y_RNA.370-201ENST00000365589 108 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 SNORA48.7-201ENST00000391302 135 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 RNA5SP261-201ENST00000410536 106 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 RPL32P35-201ENST00000415214 394 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 AL133547.1-201ENST00000448546 220 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 RNU7-67P-201ENST00000459003 62 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 RNU7-34P-201ENST00000459394 64 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.4□□□□□ -1.87
USB1Q9BQ65 MIR376B-201ENST00000614515 100 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 AC006160.2-201ENST00000637708 154 ntBASIC3.4□□□□□ -1.87
USB1Q9BQ65 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.4□□□□□ -1.87
USB1Q9BQ65 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USB1Q9BQ65 IPO8P1-201ENST00000455509 3109 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 AC007336.1-201ENST00000576365 3828 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.39□□□□□ -1.87
USB1Q9BQ65 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
USB1Q9BQ65 Y_RNA.4-201ENST00000362333 112 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 SNORA32-201ENST00000384072 121 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 Y_RNA.430-201ENST00000384081 110 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 U8.16-201ENST00000391279 133 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 AC092185.1-201ENST00000491371 97 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.39□□□□□ -1.87
USB1Q9BQ65 DNAJC19P9-201ENST00000555084 351 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 AC008739.3-201ENST00000603262 127 ntBASIC3.39□□□□□ -1.87
USB1Q9BQ65 MAPK10-362ENST00000641864 4484 ntBASIC3.38□□□□□ -1.87
USB1Q9BQ65 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
USB1Q9BQ65 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
USB1Q9BQ65 RNU6-652P-201ENST00000365488 107 ntBASIC3.38□□□□□ -1.87
USB1Q9BQ65 MIR30B-201ENST00000384850 88 ntBASIC3.38□□□□□ -1.87
USB1Q9BQ65 SNORA26.6-201ENST00000391256 115 ntBASIC3.38□□□□□ -1.87
USB1Q9BQ65 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
USB1Q9BQ65 SNORA11-201ENST00000408789 128 ntBASIC3.38□□□□□ -1.87
USB1Q9BQ65 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.38□□□□□ -1.87
USB1Q9BQ65 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.38□□□□□ -1.87
USB1Q9BQ65 AC022513.1-201ENST00000624512 117 ntBASIC3.38□□□□□ -1.87
USB1Q9BQ65 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USB1Q9BQ65 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.38□□□□□ -1.87
USB1Q9BQ65 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USB1Q9BQ65 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms