Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNORD115-41-201ENST00000363608 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-11-201ENST00000363616 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-5-201ENST00000363633 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-39-201ENST00000363694 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-4-201ENST00000363810 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-6-201ENST00000363942 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-42-201ENST00000364273 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-15-201ENST00000364809 81 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-26-201ENST00000365067 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-10-201ENST00000365073 81 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-43-201ENST00000365503 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 SNORD115-36-201ENST00000365629 82 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 U3.44-201ENST00000458938 192 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 AC093729.1-201ENST00000513074 128 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 IGKV2-26-201ENST00000518305 343 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.83□□□□□ -1.8
LRCH3Q96II8 MIR4524B-201ENST00000581569 115 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 AP000553.6-201ENST00000641242 118 ntBASIC3.83□□□□□ -1.8
LRCH3Q96II8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRCH3Q96II8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRCH3Q96II8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRCH3Q96II8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRCH3Q96II8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRCH3Q96II8 RNU4-82P-201ENST00000362443 140 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 RNU1-23P-201ENST00000363361 144 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 SNORA25.6-201ENST00000364121 118 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 RNU6-1319P-201ENST00000390855 104 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 RNU6-747P-201ENST00000390928 104 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 RNU6-241P-201ENST00000391148 104 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 RNU6-177P-201ENST00000411257 104 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 TRBV12-1-201ENST00000479785 344 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 AC090255.1-201ENST00000495779 349 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 RNA5SP356-201ENST00000515972 94 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 MIR2114-201ENST00000516645 80 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 MIR6841-201ENST00000637129 72 ntBASIC3.82□□□□□ -1.8
LRCH3Q96II8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRCH3Q96II8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRCH3Q96II8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRCH3Q96II8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.81□□□□□ -1.8
LRCH3Q96II8 SNORA22.1-201ENST00000362701 134 ntBASIC3.81□□□□□ -1.8
LRCH3Q96II8 MIR519C-201ENST00000385053 87 ntBASIC3.81□□□□□ -1.8
LRCH3Q96II8 RPL31P63-201ENST00000422565 375 ntBASIC3.81□□□□□ -1.8
LRCH3Q96II8 AL161932.1-201ENST00000437408 146 ntBASIC3.81□□□□□ -1.8
LRCH3Q96II8 AL163195.1-201ENST00000496941 348 ntBASIC3.81□□□□□ -1.8
LRCH3Q96II8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.81□□□□□ -1.8
LRCH3Q96II8 AC006111.3-201ENST00000622137 383 ntBASIC3.81□□□□□ -1.8
LRCH3Q96II8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LRCH3Q96II8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRCH3Q96II8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LRCH3Q96II8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LRCH3Q96II8 AC096644.4-201ENST00000563417 2912 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 RNA5SP482-201ENST00000391269 118 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 RNU2-63P-201ENST00000410792 194 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 AL357552.1-201ENST00000445254 415 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 RPPH1-2P-201ENST00000516688 293 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 MIR4435-1-201ENST00000582552 80 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 uc_338.32-201ENST00000615087 172 ntBASIC3.8□□□□□ -1.8
LRCH3Q96II8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LRCH3Q96II8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LRCH3Q96II8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRCH3Q96II8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.8□□□□□ -1.8
LRCH3Q96II8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.79□□□□□ -1.8
LRCH3Q96II8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRCH3Q96II8 RNU1-18P-201ENST00000363062 164 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 RNU6-1244P-201ENST00000363614 108 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 SNORA32-201ENST00000384072 121 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRCH3Q96II8 RNA5SP424-201ENST00000390988 115 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 RNU2-48P-201ENST00000410694 191 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.79□□□□□ -1.8
LRCH3Q96II8 AL445685.2-201ENST00000422551 342 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 AC114811.1-201ENST00000507207 168 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 Y_RNA.676-201ENST00000516393 96 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 AC140658.3-201ENST00000567603 271 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LRCH3Q96II8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.79□□□□□ -1.8
LRCH3Q96II8 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
LRCH3Q96II8 MFSD8-233ENST00000641482 4860 ntBASIC3.79□□□□□ -1.8
LRCH3Q96II8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRCH3Q96II8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.79□□□□□ -1.8
LRCH3Q96II8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRCH3Q96II8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRCH3Q96II8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRCH3Q96II8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LRCH3Q96II8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.78□□□□□ -1.8
LRCH3Q96II8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.8
LRCH3Q96II8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRCH3Q96II8 SNORD38.1-201ENST00000363863 68 ntBASIC3.78□□□□□ -1.8
LRCH3Q96II8 Z98742.3-201ENST00000418637 326 ntBASIC3.78□□□□□ -1.8
LRCH3Q96II8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.78□□□□□ -1.8
LRCH3Q96II8 RNU7-34P-201ENST00000459394 64 ntBASIC3.78□□□□□ -1.8
LRCH3Q96II8 RNU6-523P-201ENST00000516304 54 ntBASIC3.78□□□□□ -1.8
LRCH3Q96II8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRCH3Q96II8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
LRCH3Q96II8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms