Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MIR1278-201ENST00000408753 81 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 RN7SKP101-201ENST00000411376 320 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 AC245047.4-201ENST00000433189 144 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 SCARNA8-201ENST00000515924 131 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 RNU6-1219P-201ENST00000516143 112 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 RNU6-453P-201ENST00000516819 85 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 MRPS18CP4-201ENST00000535821 231 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 SUB1P4-201ENST00000566062 339 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.23-201ENST00000362496 106 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 RNU6-275P-201ENST00000364910 107 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 RNU6-728P-201ENST00000365375 104 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 RNU6-440P-201ENST00000390882 105 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 RN7SKP200-201ENST00000410564 320 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 SNRPGP10-201ENST00000432323 225 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 AL121914.1-201ENST00000450188 156 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 AL049861.1-201ENST00000603130 150 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 SNORA28-201ENST00000606769 126 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 AC108706.1-201ENST00000611053 297 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 AC012640.5-201ENST00000623897 319 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.98□□□□□ -2.09
CTHRC1Q96CG8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 RNA5SP482-201ENST00000391269 118 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 MIR1261-201ENST00000408659 82 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 RN7SKP51-201ENST00000410781 304 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 MLLT10P1-201ENST00000418346 262 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 AL606517.2-201ENST00000442855 241 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 RPS27P1-201ENST00000450552 247 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 RNA5SP481-201ENST00000516814 122 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 uc_338.4-201ENST00000616635 176 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 MIR8054-201ENST00000620877 86 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 MIR6873-201ENST00000622788 63 ntBASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.97□□□□□ -2.09
CTHRC1Q96CG8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 MIR126-201ENST00000362291 85 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 SNORA63D-201ENST00000364359 132 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 Y_RNA.242-201ENST00000364473 110 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 Y_RNA.253-201ENST00000364562 112 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 Y_RNA.464-201ENST00000384282 110 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 RNU6-131P-201ENST00000391144 107 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 SNORA79-201ENST00000408376 140 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 RNU2-55P-201ENST00000411146 174 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 AC090255.1-201ENST00000495779 349 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 AC109810.1-201ENST00000534066 224 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CTHRC1Q96CG8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 AC092881.1-201ENST00000638218 2733 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 SNORD68-201ENST00000363214 84 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 RNU6-112P-201ENST00000363599 104 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 AL023284.1-201ENST00000403956 276 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 SNORD11-201ENST00000459124 84 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 AC005840.1-201ENST00000498412 377 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 RNU6-126P-201ENST00000516685 103 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 AL021707.8-201ENST00000609428 183 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 AL591926.4-201ENST00000616895 298 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CTHRC1Q96CG8 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 PCNPP3-201ENST00000393579 471 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 AL034345.1-201ENST00000407768 123 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 Y_RNA.622-201ENST00000411091 108 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 FTH1P12-201ENST00000432137 551 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 snoU13.15-201ENST00000459407 104 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 RNA5SP57-201ENST00000459463 123 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 AC074198.2-201ENST00000508153 258 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 RNU6-1299P-201ENST00000516316 100 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 MIR4662B-201ENST00000579498 81 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 MIR4431-201ENST00000579990 94 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 AC087685.1-201ENST00000587507 141 ntBASIC1.94□□□□□ -2.1
CTHRC1Q96CG8 RNU6-1084P-201ENST00000362498 107 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 RNU6-1062P-201ENST00000383908 107 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 MIR15B-201ENST00000385045 98 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 SNORA26-201ENST00000391286 122 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 STAG3L5P-204ENST00000443759 179 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 OR9P1P-201ENST00000496431 281 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 Pinc.1-201ENST00000616452 154 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CTHRC1Q96CG8 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms