Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-CQ95604 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-CQ95604 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-CQ95604 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HLA-CQ95604 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HLA-CQ95604 IPO8P1-201ENST00000455509 3109 ntBASIC3.59□□□□□ -1.83
HLA-CQ95604 RNU6-862P-201ENST00000362804 105 ntBASIC3.59□□□□□ -1.83
HLA-CQ95604 Y_RNA.155-201ENST00000363632 101 ntBASIC3.59□□□□□ -1.83
HLA-CQ95604 RNU4-67P-201ENST00000364569 141 ntBASIC3.59□□□□□ -1.83
HLA-CQ95604 Y_RNA.377-201ENST00000365644 108 ntBASIC3.59□□□□□ -1.83
HLA-CQ95604 AL451046.2-201ENST00000403074 277 ntBASIC3.59□□□□□ -1.83
HLA-CQ95604 TRBV12-1-201ENST00000479785 344 ntBASIC3.59□□□□□ -1.83
HLA-CQ95604 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-CQ95604 MIR203B-201ENST00000636080 86 ntBASIC3.59□□□□□ -1.83
HLA-CQ95604 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-CQ95604 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-CQ95604 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-CQ95604 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-CQ95604 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HLA-CQ95604 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-CQ95604 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-CQ95604 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-CQ95604 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-CQ95604 RNU6-170P-201ENST00000362832 104 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 Y_RNA.241-201ENST00000364470 117 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 RNU4-16P-201ENST00000364737 141 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 RNU6-1072P-201ENST00000384703 107 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 RNU6-443P-201ENST00000384780 107 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 MIR577-201ENST00000385196 96 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 RNU6-220P-201ENST00000390919 107 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 RPS29P12-201ENST00000460178 152 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 IGLV3-17-201ENST00000519099 244 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 uc_338.25-201ENST00000613756 156 ntBASIC3.58□□□□□ -1.84
HLA-CQ95604 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
HLA-CQ95604 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HLA-CQ95604 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-CQ95604 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
HLA-CQ95604 SNORD45B-201ENST00000364617 72 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 SNORA18-201ENST00000384416 132 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HLA-CQ95604 MRPL35P3-201ENST00000421557 364 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 HLA-N-201ENST00000437516 135 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 RNA5SP57-201ENST00000459463 123 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 RNU7-61P-201ENST00000515897 61 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 RNU6-1018P-201ENST00000516577 106 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 AL360157.1-201ENST00000565962 87 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 MIR3162-201ENST00000581818 82 ntBASIC3.57□□□□□ -1.84
HLA-CQ95604 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.57□□□□□ -1.84
HLA-CQ95604 SNORD115-2-201ENST00000362842 82 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 RNY1P1-201ENST00000364372 112 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 SNORD115-20-201ENST00000365099 82 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 RNU6-242P-201ENST00000384359 107 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 RNU4-69P-201ENST00000410677 143 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 SNX2P2-201ENST00000424553 323 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 AC025554.1-201ENST00000505641 188 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 AC114811.1-201ENST00000507207 168 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 RPPH1-2P-201ENST00000516688 293 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 IGLL4P-201ENST00000614590 133 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 AL356274.2-201ENST00000624379 3752 ntBASIC3.56□□□□□ -1.84
HLA-CQ95604 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-CQ95604 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-CQ95604 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-CQ95604 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-CQ95604 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-CQ95604 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HLA-CQ95604 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-CQ95604 RNA5SP493-201ENST00000364115 91 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 RNU6-163P-201ENST00000384396 106 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 MIR1261-201ENST00000408659 82 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-CQ95604 SNORA70.14-201ENST00000516205 110 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 RNA5SP395-201ENST00000516567 118 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 AC090821.2-201ENST00000523552 176 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 ZNF861P-201ENST00000588126 639 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 HSPE1P19-201ENST00000603327 295 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 U7.3-201ENST00000616123 62 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 AC064859.1-201ENST00000624741 174 ntBASIC3.55□□□□□ -1.84
HLA-CQ95604 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-CQ95604 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-CQ95604 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-CQ95604 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-CQ95604 MIR423-201ENST00000362201 94 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 SNORA70.7-201ENST00000384159 133 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 RNU6-675P-201ENST00000384236 104 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 POLR2J4-204ENST00000418424 324 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 AL512326.2-201ENST00000426359 151 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 AC104332.2-201ENST00000429959 156 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 AC069257.2-201ENST00000441819 155 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 RPS29P31-201ENST00000446147 164 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-CQ95604 RNU2-11P-201ENST00000459191 187 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 MIR3169-201ENST00000578032 83 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 XIST_intron.1-201ENST00000619444 68 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 MIR1255B1-201ENST00000636325 63 ntBASIC3.54□□□□□ -1.84
HLA-CQ95604 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-CQ95604 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-CQ95604 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-CQ95604 MIR342-201ENST00000362212 99 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms