Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 SNORA75.5-201ENST00000391291 81 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 RNU2-55P-201ENST00000411146 174 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 SNORD77.4-201ENST00000516158 81 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 AP001340.1-201ENST00000624405 217 ntBASIC2.32□□□□□ -2.04
SLC44A3Q8N4M1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 SNORD50B-201ENST00000364995 70 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-136P-201ENST00000384663 107 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 SNORD37.2-201ENST00000391075 66 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 AL023284.1-201ENST00000403956 276 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 AL512604.1-201ENST00000404812 257 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-588P-201ENST00000410281 105 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 RNU2-63P-201ENST00000410792 194 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 MIR378D2-201ENST00000580636 98 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 AL031274.2-201ENST00000599419 203 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 AL049861.1-201ENST00000603130 150 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 AL353149.1-201ENST00000610667 244 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 MIR6844-201ENST00000637122 62 ntBASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.4-201ENST00000362333 112 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 RNA5SP125-201ENST00000364843 120 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.629-201ENST00000411368 105 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 AL353689.1-201ENST00000438895 199 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 AC011406.1-201ENST00000512440 370 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 SNORA4.4-201ENST00000515921 135 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-667P-201ENST00000517186 102 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 AC011604.1-201ENST00000545978 196 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 AC091178.2-201ENST00000584401 117 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 U6.108-201ENST00000637764 58 ntBASIC2.3□□□□□ -2.04
SLC44A3Q8N4M1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 SNORA25B-201ENST00000365507 128 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 MIR539-201ENST00000365690 78 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.432-201ENST00000384087 111 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.521-201ENST00000384560 114 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 MIR524-201ENST00000385242 87 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 U8.13-201ENST00000390842 128 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 SNORA26.9-201ENST00000391322 122 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 AL445687.1-201ENST00000439946 251 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-1333P-201ENST00000516162 93 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 RNA5SP153-201ENST00000516498 76 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-1234P-201ENST00000516877 103 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-295P-201ENST00000516901 104 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 RNU1-104P-201ENST00000517280 175 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 RPL23AP91-201ENST00000569211 455 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 MIR3616-201ENST00000584070 92 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 AL355297.2-201ENST00000604792 129 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 uc_338.4-201ENST00000616635 176 ntBASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC44A3Q8N4M1 MIR21-201ENST00000362134 72 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 Y_RNA.91-201ENST00000363042 107 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-1336P-201ENST00000383886 109 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-80P-201ENST00000384195 107 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 SNORA80E-201ENST00000384744 137 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 MIR561-201ENST00000385216 97 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 AL117342.1-201ENST00000404861 406 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 SRIP3-201ENST00000413200 219 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 RNU6-1096P-201ENST00000517089 102 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 AC073413.2-201ENST00000604332 360 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 TUG1_4.1-201ENST00000619464 181 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.28□□□□□ -2.04
SLC44A3Q8N4M1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 SNORD114-6-201ENST00000364393 72 ntBASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 CYCSP49-201ENST00000420810 319 ntBASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-1211P-201ENST00000459179 105 ntBASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 RNU7-99P-201ENST00000516271 62 ntBASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-1299P-201ENST00000516316 100 ntBASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 MIR2681-201ENST00000581814 105 ntBASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 U7.2-201ENST00000607576 63 ntBASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 MIR338-201ENST00000636369 67 ntBASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SLC44A3Q8N4M1 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.81-201ENST00000362997 102 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.140-201ENST00000363474 103 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 SNORA33-201ENST00000363664 130 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.280-201ENST00000364765 112 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.634-201ENST00000364811 113 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-1138P-201ENST00000365359 106 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 MIR520G-201ENST00000385064 90 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 MIR1253-201ENST00000408273 105 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 MIR1262-201ENST00000408276 93 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 SNORA79-201ENST00000408376 140 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 291.4 ms