Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TRIM50Q86XT4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM50Q86XT4 RNU6-268P-201ENST00000364174 107 ntBASIC3.29□□□□□ -1.88
TRIM50Q86XT4 RNU1-91P-201ENST00000364746 163 ntBASIC3.29□□□□□ -1.88
TRIM50Q86XT4 SNORA2.2-201ENST00000365473 135 ntBASIC3.29□□□□□ -1.88
TRIM50Q86XT4 RNU6-1189P-201ENST00000383958 107 ntBASIC3.29□□□□□ -1.88
TRIM50Q86XT4 RNA5SP482-201ENST00000391269 118 ntBASIC3.29□□□□□ -1.88
TRIM50Q86XT4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM50Q86XT4 Z96811.1-201ENST00000445880 108 ntBASIC3.29□□□□□ -1.88
TRIM50Q86XT4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM50Q86XT4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM50Q86XT4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM50Q86XT4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM50Q86XT4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM50Q86XT4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM50Q86XT4 RNU6-1298P-201ENST00000362456 101 ntBASIC3.28□□□□□ -1.88
TRIM50Q86XT4 Y_RNA.410-201ENST00000383992 113 ntBASIC3.28□□□□□ -1.88
TRIM50Q86XT4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM50Q86XT4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM50Q86XT4 AC022513.1-201ENST00000624512 117 ntBASIC3.28□□□□□ -1.88
TRIM50Q86XT4 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
TRIM50Q86XT4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TRIM50Q86XT4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM50Q86XT4 SNORD115-28-201ENST00000363931 81 ntBASIC3.27□□□□□ -1.89
TRIM50Q86XT4 Y_RNA.547-201ENST00000384654 119 ntBASIC3.27□□□□□ -1.89
TRIM50Q86XT4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM50Q86XT4 AC105272.1-201ENST00000438604 198 ntBASIC3.27□□□□□ -1.89
TRIM50Q86XT4 STAG3L5P-204ENST00000443759 179 ntBASIC3.27□□□□□ -1.89
TRIM50Q86XT4 RNU6-240P-201ENST00000516098 97 ntBASIC3.27□□□□□ -1.89
TRIM50Q86XT4 RNA5SP367-201ENST00000516557 118 ntBASIC3.27□□□□□ -1.89
TRIM50Q86XT4 AC079600.2-201ENST00000550076 130 ntBASIC3.27□□□□□ -1.89
TRIM50Q86XT4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TRIM50Q86XT4 Y_RNA.37-201ENST00000362606 108 ntBASIC3.26□□□□□ -1.89
TRIM50Q86XT4 SNORA80E-201ENST00000384744 137 ntBASIC3.26□□□□□ -1.89
TRIM50Q86XT4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM50Q86XT4 AL445646.1-201ENST00000431784 216 ntBASIC3.26□□□□□ -1.89
TRIM50Q86XT4 SNRPGP14-201ENST00000435400 219 ntBASIC3.26□□□□□ -1.89
TRIM50Q86XT4 RNA5SP170-201ENST00000517150 101 ntBASIC3.26□□□□□ -1.89
TRIM50Q86XT4 AC015726.2-201ENST00000620112 122 ntBASIC3.26□□□□□ -1.89
TRIM50Q86XT4 AC092435.3-201ENST00000565538 3654 ntBASIC3.26□□□□□ -1.89
TRIM50Q86XT4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM50Q86XT4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM50Q86XT4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM50Q86XT4 RNU1-58P-201ENST00000362413 163 ntBASIC3.25□□□□□ -1.89
TRIM50Q86XT4 RNA5SP136-201ENST00000410906 107 ntBASIC3.25□□□□□ -1.89
TRIM50Q86XT4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM50Q86XT4 SNORD36C-201ENST00000516733 66 ntBASIC3.25□□□□□ -1.89
TRIM50Q86XT4 RNU7-28P-201ENST00000516759 62 ntBASIC3.25□□□□□ -1.89
TRIM50Q86XT4 RNU7-70P-201ENST00000516941 66 ntBASIC3.25□□□□□ -1.89
TRIM50Q86XT4 AC004486.1-201ENST00000546846 233 ntBASIC3.25□□□□□ -1.89
TRIM50Q86XT4 MIR4319-201ENST00000577285 85 ntBASIC3.25□□□□□ -1.89
TRIM50Q86XT4 RPL12P50-201ENST00000603116 116 ntBASIC3.25□□□□□ -1.89
TRIM50Q86XT4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TRIM50Q86XT4 MIR450A1-201ENST00000362262 91 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 Y_RNA.336-201ENST00000365307 109 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 RNU6-440P-201ENST00000390882 105 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 RPL21P3-201ENST00000395517 478 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 BX510359.4-201ENST00000423750 193 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM50Q86XT4 UBBP3-201ENST00000445497 241 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 AC108938.1-201ENST00000451204 136 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM50Q86XT4 RNU7-26P-201ENST00000458980 63 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 RNU6-168P-201ENST00000516189 101 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 MIR3126-201ENST00000577443 74 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 AC005786.1-201ENST00000588553 154 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 uc_338.28-201ENST00000612082 187 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 MIR8054-201ENST00000620877 86 ntBASIC3.24□□□□□ -1.89
TRIM50Q86XT4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM50Q86XT4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.23□□□□□ -1.89
TRIM50Q86XT4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TRIM50Q86XT4 RNU6-690P-201ENST00000365242 106 ntBASIC3.23□□□□□ -1.89
TRIM50Q86XT4 SNORA9.2-201ENST00000365361 133 ntBASIC3.23□□□□□ -1.89
TRIM50Q86XT4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TRIM50Q86XT4 RNA5SP89-201ENST00000410300 108 ntBASIC3.23□□□□□ -1.89
TRIM50Q86XT4 RNU6-1116P-201ENST00000517269 99 ntBASIC3.23□□□□□ -1.89
TRIM50Q86XT4 AC007012.1-201ENST00000567192 175 ntBASIC3.23□□□□□ -1.89
TRIM50Q86XT4 AC069114.2-201ENST00000604699 304 ntBASIC3.23□□□□□ -1.89
TRIM50Q86XT4 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.23□□□□□ -1.89
TRIM50Q86XT4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM50Q86XT4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM50Q86XT4 Y_RNA.116-201ENST00000363292 103 ntBASIC3.22□□□□□ -1.89
TRIM50Q86XT4 MIR570-201ENST00000384917 97 ntBASIC3.22□□□□□ -1.89
TRIM50Q86XT4 MIR29C-201ENST00000385231 88 ntBASIC3.22□□□□□ -1.89
TRIM50Q86XT4 AL031737.1-201ENST00000450125 223 ntBASIC3.22□□□□□ -1.89
TRIM50Q86XT4 AC084364.2-201ENST00000546924 395 ntBASIC3.22□□□□□ -1.89
TRIM50Q86XT4 MIR5094-201ENST00000578766 85 ntBASIC3.22□□□□□ -1.89
TRIM50Q86XT4 ELOCP29-201ENST00000588193 334 ntBASIC3.22□□□□□ -1.89
TRIM50Q86XT4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM50Q86XT4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM50Q86XT4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM50Q86XT4 U8.9-201ENST00000365667 134 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 RNU6-163P-201ENST00000384396 106 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 RNA5SP274-201ENST00000410484 108 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 AC087499.2-201ENST00000432861 149 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 HMGN2P32-201ENST00000444648 269 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 COX6CP6-201ENST00000490840 228 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 RPS26P48-201ENST00000491713 339 ntBASIC3.21□□□□□ -1.9
TRIM50Q86XT4 AC114811.1-201ENST00000507207 168 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 391.9 ms