Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 SNORA75.4-201ENST00000391278 119 ntBASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 HMGN2P32-201ENST00000444648 269 ntBASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 AC107027.2-201ENST00000512197 115 ntBASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 AC105417.1-201ENST00000514691 285 ntBASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 SNORD22.1-201ENST00000516331 125 ntBASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 AL356055.1-201ENST00000602528 446 ntBASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 AL445984.1-201ENST00000637834 659 ntBASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 RNU6-226P-201ENST00000363778 107 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-442P-201ENST00000383968 104 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MIR522-201ENST00000385071 87 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-131P-201ENST00000391144 107 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 AL512286.1-201ENST00000439244 400 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MRPS10P1-201ENST00000448483 130 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MTND2P30-201ENST00000456663 382 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 snoU13.6-201ENST00000458785 104 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 AC069113.1-201ENST00000517763 267 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MTND1P35-201ENST00000526739 508 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 AC131235.4-201ENST00000609288 620 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-462P-201ENST00000362659 105 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-873P-201ENST00000363833 107 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-740P-201ENST00000364734 105 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 AL359672.1-201ENST00000442302 409 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNA5SP470-201ENST00000516463 106 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MIR3179-1-201ENST00000578940 84 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MIR3179-2-201ENST00000579107 84 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MIR3179-3-201ENST00000579566 84 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MIR8055-201ENST00000610739 97 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MIR6507-201ENST00000613630 70 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 MIR3179-4-201ENST00000617599 84 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.75□□□□□ -2.53
CSPG4Q6UVK1 RNU6-393P-201ENST00000384475 107 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 SNORD73A-201ENST00000386062 65 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 SSR1P2-201ENST00000415208 787 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 MTCO2P11-201ENST00000431069 680 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 AL137792.2-201ENST00000443484 235 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 SNORD45.4-201ENST00000516629 73 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 RNA5SP54-201ENST00000516951 92 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 RNU6-323P-201ENST00000521915 107 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 MIR4280-201ENST00000582178 76 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 AC009159.2-201ENST00000617603 606 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 RNU6-502P-201ENST00000362419 108 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 SNORA1-201ENST00000384107 130 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 SNORA20B-201ENST00000384220 132 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 RNU6-880P-201ENST00000384526 107 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 RNU6-298P-201ENST00000390888 96 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 AL008987.1-201ENST00000415528 237 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 SNRPGP10-201ENST00000432323 225 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 SNORD18.2-201ENST00000459604 70 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 AC011458.1-201ENST00000604034 617 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 AC005828.6-201ENST00000606610 232 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 TUSC7.1-201ENST00000610969 165 ntBASIC-0.76□□□□□ -2.53
CSPG4Q6UVK1 SNORD114-25-201ENST00000363742 72 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 RNU6-641P-201ENST00000384006 107 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 MIR487A-201ENST00000385009 80 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 MTCO3P38-201ENST00000468910 766 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 AC079140.5-201ENST00000507882 310 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 AP003072.1-201ENST00000531740 145 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 MIR4491-201ENST00000581087 68 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 MTND1P7-201ENST00000632801 297 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 RNU6-901P-201ENST00000384593 106 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 SNORA40.2-201ENST00000390847 128 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 AC010587.1-201ENST00000505809 469 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 RNU6-732P-201ENST00000516033 103 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 MTND2P32-201ENST00000521584 1038 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 AC104576.1-201ENST00000524225 88 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 AP003733.2-201ENST00000529409 171 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.77□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms