Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 Y_RNA.555-201ENST00000384673 110 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 MIR515-2-201ENST00000384883 83 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 MIR515-1-201ENST00000384884 83 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 MIR526A2-201ENST00000390198 65 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 RNU6-493P-201ENST00000391321 108 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 COX6CP10-201ENST00000416832 224 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 RPS4XP11-201ENST00000446897 772 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 RPS26P45-201ENST00000471748 340 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AC008834.1-201ENST00000511612 175 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 RNU1-142P-201ENST00000516682 145 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AC024995.1-201ENST00000523014 93 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 SUB1P4-201ENST00000566062 339 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 DEFB122-202ENST00000569013 197 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AC091178.2-201ENST00000584401 117 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AC073413.2-201ENST00000604332 360 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AC072026.1-201ENST00000605023 201 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.802-201ENST00000614892 130 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNAI3Q3KNW1 RNU6-674P-201ENST00000363831 107 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 RNU6-682P-201ENST00000363843 106 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 RNU4-13P-201ENST00000364019 141 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.233-201ENST00000364407 101 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 RNU6-886P-201ENST00000384319 105 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 SNORA8.3-201ENST00000384679 139 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 RNU6-376P-201ENST00000384731 106 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.572-201ENST00000384757 98 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 U8.13-201ENST00000390842 128 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 RNU6-381P-201ENST00000391259 108 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 AC022559.1-201ENST00000520905 205 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 MIR6845-201ENST00000613182 61 ntBASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.49□□□□□ -2.17
SNAI3Q3KNW1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 AC018630.2-201ENST00000534866 2403 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 MIR424-201ENST00000362227 98 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.7-201ENST00000362352 102 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.24-201ENST00000362508 103 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 snoU2_19.4-201ENST00000364329 80 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 RNU4-17P-201ENST00000365598 141 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 MIR520G-201ENST00000385064 90 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 MIR30A-201ENST00000385092 71 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 RNU11-5P-201ENST00000391216 129 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 PCNPP3-201ENST00000393579 471 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 RNU6-437P-201ENST00000459408 95 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 RPL23AP54-201ENST00000495129 419 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 AL163195.1-201ENST00000496941 348 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 SNORA44.1-201ENST00000517031 108 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 AL929325.1-201ENST00000603096 117 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 MIR8081-201ENST00000611533 95 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 MIR6079-201ENST00000635807 62 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 AC100821.1-201ENST00000523153 2479 ntBASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SNAI3Q3KNW1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.121-201ENST00000363309 113 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.150-201ENST00000363562 102 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNU6-112P-201ENST00000363599 104 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.180-201ENST00000363867 113 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNU6-969P-201ENST00000383900 105 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNU6-209P-201ENST00000384118 107 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.571-201ENST00000384753 98 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNA5SP323-201ENST00000391094 133 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 MIR1278-201ENST00000408753 81 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNU6-383P-201ENST00000410864 94 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 AC091021.1-201ENST00000468051 388 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 SCARNA8-201ENST00000515924 131 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNU6-861P-201ENST00000516745 106 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNU6-341P-201ENST00000516973 96 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 AC011604.1-201ENST00000545978 196 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 MIR3198-2-201ENST00000577868 80 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 MIR4724-201ENST00000579485 89 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 U6.106-201ENST00000636360 105 ntBASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SNAI3Q3KNW1 RNU6-661P-201ENST00000362409 107 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 Y_RNA.240-201ENST00000364469 95 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 Y_RNA.270-201ENST00000364693 104 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 AC005908.1-201ENST00000468701 347 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 RN7SKP164-201ENST00000516138 266 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 RNU6-250P-201ENST00000516958 103 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 MIR3945-201ENST00000581853 98 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 MIR8074-201ENST00000615081 81 ntBASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SNAI3Q3KNW1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms