Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR3162-201ENST00000581818 82 ntBASIC2.98□□□□□ -1.93
SOX4Q06945 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SOX4Q06945 SNORA1B-201ENST00000362535 133 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 RNY4P6-201ENST00000363667 96 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 RNU6-294P-201ENST00000364999 102 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 Y_RNA.323-201ENST00000365157 109 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 SNORA2.2-201ENST00000365473 135 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 RNU6-1113P-201ENST00000384348 107 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 SNORA51.10-201ENST00000384418 136 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 MIR561-201ENST00000385216 97 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 RNU6-667P-201ENST00000517186 102 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 AC004486.1-201ENST00000546846 233 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 AL353149.1-201ENST00000610667 244 ntBASIC2.97□□□□□ -1.93
SOX4Q06945 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX4Q06945 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
SOX4Q06945 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX4Q06945 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SOX4Q06945 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
SOX4Q06945 SNORA33-201ENST00000363664 130 ntBASIC2.96□□□□□ -1.94
SOX4Q06945 RNU6-1189P-201ENST00000383958 107 ntBASIC2.96□□□□□ -1.94
SOX4Q06945 MIR592-201ENST00000384959 97 ntBASIC2.96□□□□□ -1.94
SOX4Q06945 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SOX4Q06945 RNA5SP323-201ENST00000391094 133 ntBASIC2.96□□□□□ -1.94
SOX4Q06945 MIR548O-201ENST00000408583 114 ntBASIC2.96□□□□□ -1.94
SOX4Q06945 RNA5SP21-201ENST00000410917 96 ntBASIC2.96□□□□□ -1.94
SOX4Q06945 AP002004.2-201ENST00000531656 154 ntBASIC2.96□□□□□ -1.94
SOX4Q06945 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
SOX4Q06945 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SOX4Q06945 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SOX4Q06945 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SOX4Q06945 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SOX4Q06945 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.95□□□□□ -1.94
SOX4Q06945 SNORD68-201ENST00000363214 84 ntBASIC2.95□□□□□ -1.94
SOX4Q06945 RNU6-1131P-201ENST00000364955 107 ntBASIC2.95□□□□□ -1.94
SOX4Q06945 RNU6-690P-201ENST00000365242 106 ntBASIC2.95□□□□□ -1.94
SOX4Q06945 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.95□□□□□ -1.94
SOX4Q06945 AC018868.1-201ENST00000491307 315 ntBASIC2.95□□□□□ -1.94
SOX4Q06945 SNORA40.13-201ENST00000516379 120 ntBASIC2.95□□□□□ -1.94
SOX4Q06945 RNY4P20-201ENST00000516678 93 ntBASIC2.95□□□□□ -1.94
SOX4Q06945 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.95□□□□□ -1.94
SOX4Q06945 ZNF861P-201ENST00000588126 639 ntBASIC2.95□□□□□ -1.94
SOX4Q06945 AC006441.5-201ENST00000612680 209 ntBASIC2.95□□□□□ -1.94
SOX4Q06945 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SOX4Q06945 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.95□□□□□ -1.94
SOX4Q06945 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
SOX4Q06945 Y_RNA.213-201ENST00000364178 111 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 SNORD114-6-201ENST00000364393 72 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 Y_RNA.362-201ENST00000365518 110 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 SNORA8-201ENST00000384574 139 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 MIR9-1-201ENST00000385198 89 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 MIR759-201ENST00000390224 91 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 AC104332.2-201ENST00000429959 156 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.94□□□□□ -1.94
SOX4Q06945 RNU7-94P-201ENST00000459576 63 ntBASIC2.94□□□□□ -1.94
SOX4Q06945 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.94□□□□□ -1.94
SOX4Q06945 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
SOX4Q06945 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
SOX4Q06945 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SOX4Q06945 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SOX4Q06945 RNU6-349P-201ENST00000362402 107 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 RNU6-414P-201ENST00000363705 104 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 SNORD115-28-201ENST00000363931 81 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 SNORD14E-201ENST00000364009 85 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 RNU6-442P-201ENST00000383968 104 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 RNU6-49P-201ENST00000384256 107 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 RNU6-440P-201ENST00000390882 105 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.93□□□□□ -1.94
SOX4Q06945 ATP5J2P3-201ENST00000451550 258 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 RNU7-25P-201ENST00000516544 62 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 AC008264.2-201ENST00000610193 3731 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SOX4Q06945 ZNF720P1-201ENST00000562403 1939 ntBASIC2.93□□□□□ -1.94
SOX4Q06945 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SOX4Q06945 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SOX4Q06945 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SOX4Q06945 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SOX4Q06945 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SOX4Q06945 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SOX4Q06945 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
SOX4Q06945 MIR449A-201ENST00000362113 91 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 RNU6-1084P-201ENST00000362498 107 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 Y_RNA.37-201ENST00000362606 108 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 RNU6-268P-201ENST00000364174 107 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 Y_RNA.544-201ENST00000384650 113 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 SNORA11.2-201ENST00000408318 127 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 AL163195.1-201ENST00000496941 348 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 RNU7-70P-201ENST00000516941 66 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 IGKV3-31-201ENST00000523109 329 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 MIR5009-201ENST00000578736 100 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 MIR4762-201ENST00000585261 75 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 AC021443.1-201ENST00000604478 211 ntBASIC2.92□□□□□ -1.94
SOX4Q06945 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SOX4Q06945 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.91□□□□□ -1.94
SOX4Q06945 RNU6-859P-201ENST00000362728 107 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 SNORD21-201ENST00000383953 95 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 Y_RNA.547-201ENST00000384654 119 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 MIR515-2-201ENST00000384883 83 ntBASIC2.91□□□□□ -1.94
SOX4Q06945 MIR515-1-201ENST00000384884 83 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms