Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
GABREP78334 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
GABREP78334 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
GABREP78334 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
GABREP78334 Y_RNA.580-201ENST00000391004 95 ntBASIC2.47□□□□□ -2.01
GABREP78334 RNA5SP450-201ENST00000411206 102 ntBASIC2.47□□□□□ -2.01
GABREP78334 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.47□□□□□ -2.01
GABREP78334 STAG3L5P-204ENST00000443759 179 ntBASIC2.47□□□□□ -2.01
GABREP78334 RNU7-200P-201ENST00000516105 62 ntBASIC2.47□□□□□ -2.01
GABREP78334 IGKV3-31-201ENST00000523109 329 ntBASIC2.47□□□□□ -2.01
GABREP78334 MTND1P7-201ENST00000632801 297 ntBASIC2.47□□□□□ -2.01
GABREP78334 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
GABREP78334 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
GABREP78334 SNORD114-30-201ENST00000364448 72 ntBASIC2.46□□□□□ -2.02
GABREP78334 Y_RNA.337-201ENST00000365312 102 ntBASIC2.46□□□□□ -2.02
GABREP78334 RNU6-125P-201ENST00000384505 107 ntBASIC2.46□□□□□ -2.02
GABREP78334 MIR520A-201ENST00000384862 85 ntBASIC2.46□□□□□ -2.02
GABREP78334 MIR181B1-201ENST00000385240 110 ntBASIC2.46□□□□□ -2.02
GABREP78334 RNA5SP210-201ENST00000391034 120 ntBASIC2.46□□□□□ -2.02
GABREP78334 RNU4-43P-201ENST00000410628 137 ntBASIC2.46□□□□□ -2.02
GABREP78334 Y_RNA.703-201ENST00000516846 111 ntBASIC2.46□□□□□ -2.02
GABREP78334 SUB1P4-201ENST00000566062 339 ntBASIC2.46□□□□□ -2.02
GABREP78334 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
GABREP78334 SNORA63D-201ENST00000364359 132 ntBASIC2.45□□□□□ -2.02
GABREP78334 RNU6-484P-201ENST00000384016 107 ntBASIC2.45□□□□□ -2.02
GABREP78334 Y_RNA.521-201ENST00000384560 114 ntBASIC2.45□□□□□ -2.02
GABREP78334 MIR522-201ENST00000385071 87 ntBASIC2.45□□□□□ -2.02
GABREP78334 MIR27B-201ENST00000385129 97 ntBASIC2.45□□□□□ -2.02
GABREP78334 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
GABREP78334 RNA5SP482-201ENST00000391269 118 ntBASIC2.45□□□□□ -2.02
GABREP78334 RNU2-70P-201ENST00000410718 179 ntBASIC2.45□□□□□ -2.02
GABREP78334 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.45□□□□□ -2.02
GABREP78334 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.45□□□□□ -2.02
GABREP78334 RNU7-28P-201ENST00000516759 62 ntBASIC2.45□□□□□ -2.02
GABREP78334 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.45□□□□□ -2.02
GABREP78334 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
GABREP78334 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
GABREP78334 RNU6-151P-201ENST00000364158 107 ntBASIC2.44□□□□□ -2.02
GABREP78334 MIR802-201ENST00000390235 94 ntBASIC2.44□□□□□ -2.02
GABREP78334 AL590004.2-201ENST00000404787 371 ntBASIC2.44□□□□□ -2.02
GABREP78334 RN7SKP200-201ENST00000410564 320 ntBASIC2.44□□□□□ -2.02
GABREP78334 RNU6-346P-201ENST00000516288 111 ntBASIC2.44□□□□□ -2.02
GABREP78334 SNORA31.11-201ENST00000516528 139 ntBASIC2.44□□□□□ -2.02
GABREP78334 RNU7-121P-201ENST00000516604 62 ntBASIC2.44□□□□□ -2.02
GABREP78334 RNU6-197P-201ENST00000516680 100 ntBASIC2.44□□□□□ -2.02
GABREP78334 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.44□□□□□ -2.02
GABREP78334 MIR4662B-201ENST00000579498 81 ntBASIC2.44□□□□□ -2.02
GABREP78334 MIR4648-201ENST00000580107 72 ntBASIC2.44□□□□□ -2.02
GABREP78334 SNORA28-201ENST00000606769 126 ntBASIC2.44□□□□□ -2.02
GABREP78334 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
GABREP78334 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
GABREP78334 RNU6-1084P-201ENST00000362498 107 ntBASIC2.43□□□□□ -2.02
GABREP78334 RNU6-112P-201ENST00000363599 104 ntBASIC2.43□□□□□ -2.02
GABREP78334 SNORA4.2-201ENST00000365313 147 ntBASIC2.43□□□□□ -2.02
GABREP78334 RNU6-1138P-201ENST00000365359 106 ntBASIC2.43□□□□□ -2.02
GABREP78334 RNU6-187P-201ENST00000384139 106 ntBASIC2.43□□□□□ -2.02
GABREP78334 RNU6-950P-201ENST00000384651 107 ntBASIC2.43□□□□□ -2.02
GABREP78334 FTH1P12-201ENST00000432137 551 ntBASIC2.43□□□□□ -2.02
GABREP78334 HSPE1P9-201ENST00000440046 311 ntBASIC2.43□□□□□ -2.02
GABREP78334 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.43□□□□□ -2.02
GABREP78334 MRPS17P9-201ENST00000511924 393 ntBASIC2.43□□□□□ -2.02
GABREP78334 SNORA31.10-201ENST00000516482 106 ntBASIC2.43□□□□□ -2.02
GABREP78334 RNU2-19P-201ENST00000517288 84 ntBASIC2.43□□□□□ -2.02
GABREP78334 AC087685.1-201ENST00000587507 141 ntBASIC2.43□□□□□ -2.02
GABREP78334 RNY1P5-201ENST00000383890 115 ntBASIC2.42□□□□□ -2.02
GABREP78334 SNORA26-201ENST00000391286 122 ntBASIC2.42□□□□□ -2.02
GABREP78334 RN7SKP223-201ENST00000410582 62 ntBASIC2.42□□□□□ -2.02
GABREP78334 RNU4-61P-201ENST00000411243 107 ntBASIC2.42□□□□□ -2.02
GABREP78334 AL158823.1-201ENST00000418441 478 ntBASIC2.42□□□□□ -2.02
GABREP78334 snoU13.23-201ENST00000458863 104 ntBASIC2.42□□□□□ -2.02
GABREP78334 RPL23AP63-201ENST00000498752 471 ntBASIC2.42□□□□□ -2.02
GABREP78334 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.42□□□□□ -2.02
GABREP78334 RNA5SP153-201ENST00000516498 76 ntBASIC2.42□□□□□ -2.02
GABREP78334 RNU6-126P-201ENST00000516685 103 ntBASIC2.42□□□□□ -2.02
GABREP78334 RNA5SP437-201ENST00000517249 129 ntBASIC2.42□□□□□ -2.02
GABREP78334 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.42□□□□□ -2.02
GABREP78334 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.42□□□□□ -2.02
GABREP78334 MIR378D2-201ENST00000580636 98 ntBASIC2.42□□□□□ -2.02
GABREP78334 DNAJC19P2-201ENST00000593340 302 ntBASIC2.42□□□□□ -2.02
GABREP78334 Y_RNA.778-201ENST00000620203 90 ntBASIC2.42□□□□□ -2.02
GABREP78334 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.42□□□□□ -2.02
GABREP78334 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
GABREP78334 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
GABREP78334 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
GABREP78334 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
GABREP78334 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
GABREP78334 Y_RNA.91-201ENST00000363042 107 ntBASIC2.41□□□□□ -2.02
GABREP78334 Y_RNA.486-201ENST00000384398 107 ntBASIC2.41□□□□□ -2.02
GABREP78334 SNORD72-201ENST00000390994 80 ntBASIC2.41□□□□□ -2.02
GABREP78334 SNORD37.2-201ENST00000391075 66 ntBASIC2.41□□□□□ -2.02
GABREP78334 AL034345.1-201ENST00000407768 123 ntBASIC2.41□□□□□ -2.02
GABREP78334 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.41□□□□□ -2.02
GABREP78334 AC055731.1-201ENST00000474387 401 ntBASIC2.41□□□□□ -2.02
GABREP78334 AC008507.4-201ENST00000585464 127 ntBASIC2.41□□□□□ -2.02
GABREP78334 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.41□□□□□ -2.02
GABREP78334 MIR3658-201ENST00000636291 56 ntBASIC2.41□□□□□ -2.02
GABREP78334 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
GABREP78334 ZNF702P-202ENST00000434269 1966 ntBASIC2.4□□□□□ -2.02
GABREP78334 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
GABREP78334 AL596028.1-201ENST00000326971 197 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms