Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 Y_RNA.714-201ENST00000517065 90 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 AC008507.4-201ENST00000585464 127 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 AC097639.2-201ENST00000603159 172 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 MIR6817-201ENST00000615588 66 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 MIR8054-201ENST00000620877 86 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 AC091895.1-201ENST00000624494 256 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.18□□□□□ -2.06
CLRN1P58418 AP006437.1-201ENST00000641440 3685 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.17□□□□□ -2.06
CLRN1P58418 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLRN1P58418 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.17□□□□□ -2.06
CLRN1P58418 AC010332.2-201ENST00000613083 1904 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
CLRN1P58418 Y_RNA.265-201ENST00000364677 108 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 RNU6-81P-201ENST00000365608 104 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 RNU1-52P-201ENST00000384190 164 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 RNU6-440P-201ENST00000390882 105 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 SNORA75.5-201ENST00000391291 81 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 RNU6-257P-201ENST00000410238 98 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CLRN1P58418 FTH1P12-201ENST00000432137 551 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 RNU7-197P-201ENST00000458836 62 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.17□□□□□ -2.06
CLRN1P58418 RNU6-126P-201ENST00000516685 103 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 AC091544.4-201ENST00000555268 342 ntBASIC2.17□□□□□ -2.06
CLRN1P58418 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLRN1P58418 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLRN1P58418 MIR6073-201ENST00000352083 89 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 RNY1P11-201ENST00000363759 113 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 RNA5SP68-201ENST00000363885 119 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 SNORA67.1-201ENST00000364749 141 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 SNORD113-1-201ENST00000365321 69 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CLRN1P58418 SNORA48.1-201ENST00000390879 135 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 Y_RNA.586-201ENST00000391146 98 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 SNORA11.2-201ENST00000408318 127 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 RNA5SP501-201ENST00000410990 112 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.16□□□□□ -2.06
CLRN1P58418 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.16□□□□□ -2.06
CLRN1P58418 AL513328.1-201ENST00000446460 224 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 AC108938.1-201ENST00000451204 136 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 AC092991.1-201ENST00000477176 376 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 RNA5SP148-201ENST00000516527 94 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 RNU6-365P-201ENST00000517113 106 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 AC087685.1-201ENST00000587507 141 ntBASIC2.16□□□□□ -2.06
CLRN1P58418 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.16□□□□□ -2.06
CLRN1P58418 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CLRN1P58418 SNORA25.7-201ENST00000364375 127 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 SNORD50B-201ENST00000364995 70 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 Y_RNA.510-201ENST00000384511 114 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 RNA5SP482-201ENST00000391269 118 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 AL359511.1-201ENST00000402970 211 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 RNA5SP181-201ENST00000410246 98 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 AC007064.1-201ENST00000412238 351 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.15□□□□□ -2.07
CLRN1P58418 AC069257.2-201ENST00000441819 155 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 STAG3L5P-204ENST00000443759 179 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.15□□□□□ -2.07
CLRN1P58418 SNORA31.10-201ENST00000516482 106 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.15□□□□□ -2.07
CLRN1P58418 MIR4762-201ENST00000585261 75 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 MIR6852-201ENST00000621699 66 ntBASIC2.15□□□□□ -2.07
CLRN1P58418 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CLRN1P58418 RNU6-1084P-201ENST00000362498 107 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 Y_RNA.66-201ENST00000362862 102 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 SNORA63D-201ENST00000364359 132 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 U8.5-201ENST00000364528 136 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 Y_RNA.420-201ENST00000384043 110 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 RNU6-460P-201ENST00000391158 108 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.14□□□□□ -2.07
CLRN1P58418 UBE2DNL-203ENST00000474922 222 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 RNA5SP24-201ENST00000516478 95 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 RNU7-193P-201ENST00000516723 65 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 RNU7-28P-201ENST00000516759 62 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 SNORA31.25-201ENST00000517242 134 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 AC006023.1-201ENST00000603944 259 ntBASIC2.14□□□□□ -2.07
CLRN1P58418 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CLRN1P58418 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CLRN1P58418 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLRN1P58418 SNORA25.6-201ENST00000364121 118 ntBASIC2.13□□□□□ -2.07
CLRN1P58418 SNORA40-201ENST00000388090 126 ntBASIC2.13□□□□□ -2.07
CLRN1P58418 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CLRN1P58418 AL158823.1-201ENST00000418441 478 ntBASIC2.13□□□□□ -2.07
CLRN1P58418 MTND4LP9-201ENST00000427694 174 ntBASIC2.13□□□□□ -2.07
CLRN1P58418 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.13□□□□□ -2.07
CLRN1P58418 HSPE1P9-201ENST00000440046 311 ntBASIC2.13□□□□□ -2.07
CLRN1P58418 Y_RNA.666-201ENST00000516187 112 ntBASIC2.13□□□□□ -2.07
CLRN1P58418 RNU6-504P-201ENST00000516568 104 ntBASIC2.13□□□□□ -2.07
CLRN1P58418 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
CLRN1P58418 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLRN1P58418 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLRN1P58418 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.12□□□□□ -2.07
CLRN1P58418 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLRN1P58418 Y_RNA.251-201ENST00000364551 99 ntBASIC2.12□□□□□ -2.07
CLRN1P58418 SNORA4.2-201ENST00000365313 147 ntBASIC2.12□□□□□ -2.07
CLRN1P58418 RNU1-51P-201ENST00000365345 176 ntBASIC2.12□□□□□ -2.07
CLRN1P58418 MIR802-201ENST00000390235 94 ntBASIC2.12□□□□□ -2.07
CLRN1P58418 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLRN1P58418 AC026436.1-201ENST00000510537 270 ntBASIC2.12□□□□□ -2.07
CLRN1P58418 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms