Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.13□□□□□ -1.75
NUBP1P53384 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUBP1P53384 AP006437.1-201ENST00000641440 3685 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 MIR448-201ENST00000362131 111 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 SNORA25.9-201ENST00000365087 128 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 CKS1BP6-201ENST00000424932 240 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 RN7SL601P-201ENST00000471221 293 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 RPS29P11-201ENST00000496507 171 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 SNORD14A-201ENST00000606526 91 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 MIR3651-201ENST00000630427 90 ntBASIC4.12□□□□□ -1.75
NUBP1P53384 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NUBP1P53384 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NUBP1P53384 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUBP1P53384 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUBP1P53384 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUBP1P53384 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NUBP1P53384 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUBP1P53384 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUBP1P53384 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUBP1P53384 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.11□□□□□ -1.75
NUBP1P53384 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.11□□□□□ -1.75
NUBP1P53384 Y_RNA.340-201ENST00000365330 92 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 RPL23AP6-201ENST00000446637 472 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.11□□□□□ -1.75
NUBP1P53384 RPS29P19-201ENST00000479709 171 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 RNA5SP249-201ENST00000516127 99 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 CYP3A52P-201ENST00000563326 91 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 AC133485.1-201ENST00000567176 124 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 RPL12P50-201ENST00000603116 116 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 AP000753.3-201ENST00000604083 169 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 AL512598.1-201ENST00000610158 273 ntBASIC4.11□□□□□ -1.75
NUBP1P53384 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC4.11□□□□□ -1.75
NUBP1P53384 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUBP1P53384 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUBP1P53384 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
NUBP1P53384 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NUBP1P53384 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUBP1P53384 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
NUBP1P53384 RNA5SP133-201ENST00000363368 119 ntBASIC4.1□□□□□ -1.75
NUBP1P53384 RNU1-63P-201ENST00000383902 164 ntBASIC4.1□□□□□ -1.75
NUBP1P53384 SNORD21-201ENST00000383953 95 ntBASIC4.1□□□□□ -1.75
NUBP1P53384 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUBP1P53384 Y_RNA.660-201ENST00000516002 120 ntBASIC4.1□□□□□ -1.75
NUBP1P53384 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
NUBP1P53384 Y_RNA.788-201ENST00000622394 112 ntBASIC4.1□□□□□ -1.75
NUBP1P53384 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUBP1P53384 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUBP1P53384 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUBP1P53384 SCN1A-220ENST00000641603 12506 ntBASIC4.09□□□□□ -1.75
NUBP1P53384 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUBP1P53384 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUBP1P53384 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.09□□□□□ -1.75
NUBP1P53384 HSBP1P2-201ENST00000299671 229 ntBASIC4.09□□□□□ -1.75
NUBP1P53384 MIRLET7A1-201ENST00000362295 80 ntBASIC4.09□□□□□ -1.75
NUBP1P53384 MIR921-201ENST00000401133 56 ntBASIC4.09□□□□□ -1.75
NUBP1P53384 RN7SKP167-201ENST00000411047 285 ntBASIC4.09□□□□□ -1.75
NUBP1P53384 RPL23AP94-201ENST00000512518 302 ntBASIC4.09□□□□□ -1.75
NUBP1P53384 RN7SKP83-201ENST00000516512 178 ntBASIC4.09□□□□□ -1.75
NUBP1P53384 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUBP1P53384 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NUBP1P53384 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.09□□□□□ -1.75
NUBP1P53384 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.75
NUBP1P53384 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.09□□□□□ -1.75
NUBP1P53384 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUBP1P53384 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUBP1P53384 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUBP1P53384 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.08□□□□□ -1.76
NUBP1P53384 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUBP1P53384 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUBP1P53384 RNU1-70P-201ENST00000362618 164 ntBASIC4.08□□□□□ -1.76
NUBP1P53384 RN7SKP132-201ENST00000516001 208 ntBASIC4.08□□□□□ -1.76
NUBP1P53384 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUBP1P53384 MIR3134-201ENST00000579433 74 ntBASIC4.08□□□□□ -1.76
NUBP1P53384 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC4.08□□□□□ -1.76
NUBP1P53384 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.08□□□□□ -1.76
NUBP1P53384 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.08□□□□□ -1.76
NUBP1P53384 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUBP1P53384 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUBP1P53384 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NUBP1P53384 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUBP1P53384 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.07□□□□□ -1.76
NUBP1P53384 Y_RNA.508-201ENST00000384502 114 ntBASIC4.07□□□□□ -1.76
NUBP1P53384 AL035423.1-201ENST00000420331 213 ntBASIC4.07□□□□□ -1.76
NUBP1P53384 AC104332.2-201ENST00000429959 156 ntBASIC4.07□□□□□ -1.76
NUBP1P53384 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.07□□□□□ -1.76
NUBP1P53384 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.07□□□□□ -1.76
NUBP1P53384 AC087499.8-201ENST00000578406 226 ntBASIC4.07□□□□□ -1.76
NUBP1P53384 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
NUBP1P53384 AL513423.1-201ENST00000621695 132 ntBASIC4.07□□□□□ -1.76
NUBP1P53384 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUBP1P53384 AC131280.1-202ENST00000624067 4211 ntBASIC4.07□□□□□ -1.76
NUBP1P53384 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
NUBP1P53384 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
NUBP1P53384 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUBP1P53384 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.06□□□□□ -1.76
NUBP1P53384 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUBP1P53384 SNORA63.2-201ENST00000362603 126 ntBASIC4.06□□□□□ -1.76
NUBP1P53384 AC017083.1-201ENST00000428093 483 ntBASIC4.06□□□□□ -1.76
NUBP1P53384 AC006011.1-201ENST00000442758 349 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms