Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 SCARNA3-201ENST00000517097 143 ntBASIC3.09□□□□□ -1.91
NID1P14543 AC002984.1-201ENST00000591692 448 ntBASIC3.09□□□□□ -1.91
NID1P14543 AL353149.1-201ENST00000610667 244 ntBASIC3.09□□□□□ -1.91
NID1P14543 MIR7157-201ENST00000635801 60 ntBASIC3.09□□□□□ -1.91
NID1P14543 MIR1255B1-201ENST00000636325 63 ntBASIC3.09□□□□□ -1.91
NID1P14543 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NID1P14543 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.09□□□□□ -1.92
NID1P14543 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NID1P14543 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NID1P14543 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NID1P14543 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
NID1P14543 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NID1P14543 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NID1P14543 MIR342-201ENST00000362212 99 ntBASIC3.08□□□□□ -1.92
NID1P14543 SNORA18-201ENST00000384416 132 ntBASIC3.08□□□□□ -1.92
NID1P14543 SNORD116-22-201ENST00000384430 92 ntBASIC3.08□□□□□ -1.92
NID1P14543 AL022718.1-201ENST00000412004 84 ntBASIC3.08□□□□□ -1.92
NID1P14543 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
NID1P14543 AL035398.1-201ENST00000430869 322 ntBASIC3.08□□□□□ -1.92
NID1P14543 MICF-203ENST00000432679 129 ntBASIC3.08□□□□□ -1.92
NID1P14543 CYP2C59P-201ENST00000457790 269 ntBASIC3.08□□□□□ -1.92
NID1P14543 SNORD45.4-201ENST00000516629 73 ntBASIC3.08□□□□□ -1.92
NID1P14543 AC073476.4-201ENST00000628409 72 ntBASIC3.08□□□□□ -1.92
NID1P14543 MIR7153-201ENST00000637758 57 ntBASIC3.08□□□□□ -1.92
NID1P14543 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NID1P14543 RNU1-23P-201ENST00000363361 144 ntBASIC3.07□□□□□ -1.92
NID1P14543 RNU6-787P-201ENST00000384032 107 ntBASIC3.07□□□□□ -1.92
NID1P14543 SNORA8-201ENST00000384574 139 ntBASIC3.07□□□□□ -1.92
NID1P14543 RNA5SP144-201ENST00000410846 116 ntBASIC3.07□□□□□ -1.92
NID1P14543 RNA5SP120-201ENST00000410900 112 ntBASIC3.07□□□□□ -1.92
NID1P14543 RPL23AP94-201ENST00000512518 302 ntBASIC3.07□□□□□ -1.92
NID1P14543 SNORD59.2-201ENST00000516873 68 ntBASIC3.07□□□□□ -1.92
NID1P14543 RNU6-711P-201ENST00000517255 106 ntBASIC3.07□□□□□ -1.92
NID1P14543 MIR5588-201ENST00000581890 63 ntBASIC3.07□□□□□ -1.92
NID1P14543 MIR3199-1-201ENST00000582434 88 ntBASIC3.07□□□□□ -1.92
NID1P14543 Y_RNA.773-201ENST00000607168 90 ntBASIC3.07□□□□□ -1.92
NID1P14543 MIR6852-201ENST00000621699 66 ntBASIC3.07□□□□□ -1.92
NID1P14543 AC064859.1-201ENST00000624741 174 ntBASIC3.07□□□□□ -1.92
NID1P14543 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NID1P14543 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.07□□□□□ -1.92
NID1P14543 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NID1P14543 RNU6-1125P-201ENST00000363601 107 ntBASIC3.06□□□□□ -1.92
NID1P14543 SNORA38.1-201ENST00000364172 131 ntBASIC3.06□□□□□ -1.92
NID1P14543 SNORD45B-201ENST00000364617 72 ntBASIC3.06□□□□□ -1.92
NID1P14543 RNU6-60P-201ENST00000364792 103 ntBASIC3.06□□□□□ -1.92
NID1P14543 RNU6-979P-201ENST00000383896 107 ntBASIC3.06□□□□□ -1.92
NID1P14543 SNORA80E-201ENST00000384744 137 ntBASIC3.06□□□□□ -1.92
NID1P14543 MIR515-2-201ENST00000384883 83 ntBASIC3.06□□□□□ -1.92
NID1P14543 MIR515-1-201ENST00000384884 83 ntBASIC3.06□□□□□ -1.92
NID1P14543 MIR95-201ENST00000385072 81 ntBASIC3.06□□□□□ -1.92
NID1P14543 RNU6-402P-201ENST00000410678 103 ntBASIC3.06□□□□□ -1.92
NID1P14543 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.06□□□□□ -1.92
NID1P14543 AL109933.2-201ENST00000452651 260 ntBASIC3.06□□□□□ -1.92
NID1P14543 ICE2P2-201ENST00000483823 2787 ntBASIC3.06□□□□□ -1.92
NID1P14543 AC004812.1-201ENST00000540773 146 ntBASIC3.06□□□□□ -1.92
NID1P14543 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.06□□□□□ -1.92
NID1P14543 AL513534.2-201ENST00000603836 250 ntBASIC3.06□□□□□ -1.92
NID1P14543 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.06□□□□□ -1.92
NID1P14543 AC110079.1-202ENST00000635213 138 ntBASIC3.06□□□□□ -1.92
NID1P14543 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NID1P14543 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NID1P14543 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
NID1P14543 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NID1P14543 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NID1P14543 GABRG2-229ENST00000641017 3628 ntBASIC3.05□□□□□ -1.92
NID1P14543 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
NID1P14543 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
NID1P14543 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NID1P14543 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NID1P14543 MIR605-201ENST00000385078 83 ntBASIC3.05□□□□□ -1.92
NID1P14543 SNORA48.8-201ENST00000391324 134 ntBASIC3.05□□□□□ -1.92
NID1P14543 BTF3P4-201ENST00000418852 495 ntBASIC3.05□□□□□ -1.92
NID1P14543 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.05□□□□□ -1.92
NID1P14543 AC005326.1-201ENST00000429197 123 ntBASIC3.05□□□□□ -1.92
NID1P14543 CST9LP2-201ENST00000437612 320 ntBASIC3.05□□□□□ -1.92
NID1P14543 RNU2-11P-201ENST00000459191 187 ntBASIC3.05□□□□□ -1.92
NID1P14543 RN7SL442P-201ENST00000473804 320 ntBASIC3.05□□□□□ -1.92
NID1P14543 RNU6-857P-201ENST00000515893 110 ntBASIC3.05□□□□□ -1.92
NID1P14543 AC104027.1-201ENST00000521887 300 ntBASIC3.05□□□□□ -1.92
NID1P14543 MIR548Z-201ENST00000584743 97 ntBASIC3.05□□□□□ -1.92
NID1P14543 YPEL5P2-201ENST00000605553 359 ntBASIC3.05□□□□□ -1.92
NID1P14543 uc_338.1-201ENST00000612113 180 ntBASIC3.05□□□□□ -1.92
NID1P14543 CTSLP2-204ENST00000629029 392 ntBASIC3.05□□□□□ -1.92
NID1P14543 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
NID1P14543 Y_RNA.299-201ENST00000364973 94 ntBASIC3.04□□□□□ -1.92
NID1P14543 RNU6-1328P-201ENST00000410938 106 ntBASIC3.04□□□□□ -1.92
NID1P14543 AL512326.2-201ENST00000426359 151 ntBASIC3.04□□□□□ -1.92
NID1P14543 SNORA48.11-201ENST00000517015 89 ntBASIC3.04□□□□□ -1.92
NID1P14543 AC024995.1-201ENST00000523014 93 ntBASIC3.04□□□□□ -1.92
NID1P14543 MIR4666B-201ENST00000578142 81 ntBASIC3.04□□□□□ -1.92
NID1P14543 MIR4777-201ENST00000583710 86 ntBASIC3.04□□□□□ -1.92
NID1P14543 AC095038.3-201ENST00000634439 195 ntBASIC3.04□□□□□ -1.92
NID1P14543 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.04□□□□□ -1.92
NID1P14543 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.04□□□□□ -1.92
NID1P14543 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NID1P14543 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.04□□□□□ -1.92
NID1P14543 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NID1P14543 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NID1P14543 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.03□□□□□ -1.92
NID1P14543 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms