Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL6A2P12110 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL6A2P12110 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
COL6A2P12110 RNA5SP432-201ENST00000362480 116 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 Y_RNA.91-201ENST00000363042 107 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 RNU1-91P-201ENST00000364746 163 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 Y_RNA.420-201ENST00000384043 110 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 FTH1P12-201ENST00000432137 551 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 RNU6-479P-201ENST00000516348 105 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 GTF3AP2-201ENST00000557014 266 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 MIR3945-201ENST00000581853 98 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 AC008507.4-201ENST00000585464 127 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 AC022217.4-201ENST00000604389 163 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.51□□□□□ -2.01
COL6A2P12110 AL591926.4-201ENST00000616895 298 ntBASIC2.51□□□□□ -2.01
COL6A2P12110 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
COL6A2P12110 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
COL6A2P12110 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
COL6A2P12110 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
COL6A2P12110 Y_RNA.66-201ENST00000362862 102 ntBASIC2.5□□□□□ -2.01
COL6A2P12110 MIR539-201ENST00000365690 78 ntBASIC2.5□□□□□ -2.01
COL6A2P12110 Y_RNA.542-201ENST00000384641 111 ntBASIC2.5□□□□□ -2.01
COL6A2P12110 MIR522-201ENST00000385071 87 ntBASIC2.5□□□□□ -2.01
COL6A2P12110 MIR4762-201ENST00000585261 75 ntBASIC2.5□□□□□ -2.01
COL6A2P12110 TUG1_4.1-201ENST00000619464 181 ntBASIC2.5□□□□□ -2.01
COL6A2P12110 CTSLP2-204ENST00000629029 392 ntBASIC2.5□□□□□ -2.01
COL6A2P12110 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL6A2P12110 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL6A2P12110 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL6A2P12110 MIR126-201ENST00000362291 85 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 SNORD115-3-201ENST00000363100 82 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 RNU6-1019P-201ENST00000364424 107 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 U8.5-201ENST00000364528 136 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 AC105272.1-201ENST00000438604 198 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 RNU7-28P-201ENST00000516759 62 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 RNU6-365P-201ENST00000517113 106 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 AC091544.4-201ENST00000555268 342 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 MIR4435-1-201ENST00000582552 80 ntBASIC2.49□□□□□ -2.01
COL6A2P12110 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL6A2P12110 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL6A2P12110 SNORA6-201ENST00000384033 151 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 SNORA20-201ENST00000384662 132 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
COL6A2P12110 MIR1283-2-201ENST00000408621 87 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.48□□□□□ -2.01
COL6A2P12110 TRBV12-1-201ENST00000479785 344 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 MRPS17P9-201ENST00000511924 393 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 RNA5SP356-201ENST00000515972 94 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 RNU6-504P-201ENST00000516568 104 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 IGLV3-17-201ENST00000519099 244 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 MIR3162-201ENST00000581818 82 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 U4.3-201ENST00000621047 82 ntBASIC2.48□□□□□ -2.01
COL6A2P12110 RNU6-859P-201ENST00000362728 107 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 RNY1P11-201ENST00000363759 113 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 SNORD24-201ENST00000383884 75 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 RNU6-1168P-201ENST00000390831 104 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 SNORA12.1-201ENST00000390873 148 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 RNU6-460P-201ENST00000391158 108 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 RNA5SP465-201ENST00000391195 109 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 RNA5SP482-201ENST00000391269 118 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 RNU2-51P-201ENST00000410708 197 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.47□□□□□ -2.01
COL6A2P12110 RNU2-56P-201ENST00000516826 190 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 AC090142.3-201ENST00000519012 385 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 AC084364.2-201ENST00000546924 395 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 MIR5694-201ENST00000581190 76 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 AL365205.2-201ENST00000594586 68 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 AC069114.2-201ENST00000604699 304 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 AC245884.12-201ENST00000615364 59 ntBASIC2.47□□□□□ -2.01
COL6A2P12110 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
COL6A2P12110 MIR518A2-201ENST00000384966 87 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 MIR27B-201ENST00000385129 97 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 Y_RNA.584-201ENST00000391090 114 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 RNU11-3P-201ENST00000391111 133 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 AC069257.2-201ENST00000441819 155 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 AL606517.2-201ENST00000442855 241 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.46□□□□□ -2.02
COL6A2P12110 AP001328.1-201ENST00000528550 176 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
COL6A2P12110 AC007336.1-201ENST00000576365 3828 ntBASIC2.46□□□□□ -2.02
COL6A2P12110 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.46□□□□□ -2.02
COL6A2P12110 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL6A2P12110 SNORD72-201ENST00000390994 80 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 HMGN2P39-201ENST00000398005 273 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 AC245047.3-201ENST00000429428 127 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 AC008267.6-201ENST00000441664 139 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 AC108938.1-201ENST00000451204 136 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.45□□□□□ -2.02
COL6A2P12110 AC007751.1-201ENST00000529260 376 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.45□□□□□ -2.02
COL6A2P12110 MIR4319-201ENST00000577285 85 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 AC131055.1-201ENST00000584626 316 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 U7.2-201ENST00000607576 63 ntBASIC2.45□□□□□ -2.02
COL6A2P12110 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL6A2P12110 AL136360.1-201ENST00000503377 1900 ntBASIC2.44□□□□□ -2.02
COL6A2P12110 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms