Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 U2.20-201ENST00000613956 192 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CSB-PGBD3P0DP91 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 Y_RNA.99-201ENST00000363138 105 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 AC007064.1-201ENST00000412238 351 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 COX6CP6-201ENST00000490840 228 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 MRPS17P9-201ENST00000511924 393 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 SNORA40.13-201ENST00000516379 120 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 RN7SKP282-201ENST00000516824 299 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-1270P-201ENST00000517128 108 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 SNORD53-201ENST00000579969 78 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 AL137067.1-201ENST00000615933 120 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 AC064859.1-201ENST00000624741 174 ntBASIC3.65□□□□□ -1.83
CSB-PGBD3P0DP91 Y_RNA.323-201ENST00000365157 109 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-1292P-201ENST00000383856 107 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 MIR512-1-201ENST00000384913 84 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 HMGN2P34-201ENST00000437647 269 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-1146P-201ENST00000516282 102 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-109P-201ENST00000516364 107 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 RNA5SP24-201ENST00000516478 95 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 RNA5SP281-201ENST00000516504 135 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-184P-201ENST00000516514 107 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-126P-201ENST00000516685 103 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 SCARNA15-202ENST00000516881 127 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 ZNF861P-201ENST00000588126 639 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-94P-201ENST00000607728 107 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 JPX_2.1-201ENST00000614161 69 ntBASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CSB-PGBD3P0DP91 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 RNA5SP383-201ENST00000362934 120 ntBASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 RNY1P7-201ENST00000384743 110 ntBASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 AC244505.4-201ENST00000434905 287 ntBASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 SSXP5-201ENST00000443473 287 ntBASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-56P-201ENST00000516986 93 ntBASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 MIR376A2-201ENST00000636782 80 ntBASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CSB-PGBD3P0DP91 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 RNA5SP173-201ENST00000364857 136 ntBASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-1275P-201ENST00000391087 107 ntBASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 EDDM3CP-201ENST00000415977 425 ntBASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 AC011406.1-201ENST00000512440 370 ntBASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-113P-201ENST00000516653 101 ntBASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-1096P-201ENST00000517089 102 ntBASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 MIR7153-201ENST00000637758 57 ntBASIC3.62□□□□□ -1.83
CSB-PGBD3P0DP91 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 U8.2-201ENST00000363156 134 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-1072P-201ENST00000384703 107 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-443P-201ENST00000384780 107 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 MIR548A2-201ENST00000384956 97 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 SNORD77.3-201ENST00000391113 65 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 AL117342.1-201ENST00000404861 406 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 MIR1262-201ENST00000408276 93 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 SNORA19.1-201ENST00000410656 129 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 AC092185.1-201ENST00000491371 97 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 Y_RNA.666-201ENST00000516187 112 ntBASIC3.61□□□□□ -1.83
CSB-PGBD3P0DP91 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 snoU2-30.2-201ENST00000362805 70 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-888P-201ENST00000363010 101 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 SNORD56.5-201ENST00000364281 72 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-160P-201ENST00000384591 107 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 SNORA67.4-201ENST00000384688 142 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 SNORA46-201ENST00000384762 135 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 MIR590-201ENST00000385008 97 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 RPS27P29-201ENST00000463110 252 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-1041P-201ENST00000516254 102 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 AP003327.1-201ENST00000529684 127 ntBASIC3.6□□□□□ -1.83
CSB-PGBD3P0DP91 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 AL589743.1-201ENST00000551932 2712 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 Y_RNA.49-201ENST00000362714 112 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 SNORD114-6-201ENST00000364393 72 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 Y_RNA.544-201ENST00000384650 113 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 MIR181B1-201ENST00000385240 110 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 RNA5SP293-201ENST00000410527 113 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 Y_RNA.621-201ENST00000411065 96 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 AL353689.1-201ENST00000438895 199 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 RNU7-26P-201ENST00000458980 63 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-240P-201ENST00000516098 97 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 RNU6-970P-201ENST00000516312 107 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 AL442128.1-201ENST00000615151 90 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 MIR7843-201ENST00000622274 79 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 MIR1245B-201ENST00000636115 69 ntBASIC3.59□□□□□ -1.83
CSB-PGBD3P0DP91 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CSB-PGBD3P0DP91 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CSB-PGBD3P0DP91 Y_RNA.362-201ENST00000365518 110 ntBASIC3.58□□□□□ -1.84
CSB-PGBD3P0DP91 RNU6-573P-201ENST00000383938 106 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms