Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CNOT3O75175 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CNOT3O75175 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CNOT3O75175 RNA5SP432-201ENST00000362480 116 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 RNY1P5-201ENST00000383890 115 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 RNU6-239P-201ENST00000390990 99 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 RNU6-1228P-201ENST00000391014 107 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.02□□□□□ -2.09
CNOT3O75175 AL353689.1-201ENST00000438895 199 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 AL021397.1-201ENST00000451806 248 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 RNU6-561P-201ENST00000516222 102 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 RNU1-142P-201ENST00000516682 145 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 RPL23AP91-201ENST00000569211 455 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 MIR3910-1-201ENST00000580936 111 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 MIR7843-201ENST00000622274 79 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 U2.22-201ENST00000636441 106 ntBASIC2.02□□□□□ -2.09
CNOT3O75175 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CNOT3O75175 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CNOT3O75175 SNORA33-201ENST00000363664 130 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 Y_RNA.203-201ENST00000364106 102 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 RNA5SP493-201ENST00000364115 91 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 Y_RNA.267-201ENST00000364679 109 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 SNORA8-201ENST00000384574 139 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 MIR764-201ENST00000390811 85 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 Y_RNA.580-201ENST00000391004 95 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 AC023449.1-201ENST00000454464 154 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 RNU7-99P-201ENST00000516271 62 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 RNU6-406P-201ENST00000516470 107 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 RNU6-1291P-201ENST00000516591 104 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 RNU7-193P-201ENST00000516723 65 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.01□□□□□ -2.09
CNOT3O75175 AC012493.3-201ENST00000604494 112 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 JPX_2.1-201ENST00000614161 69 ntBASIC2.01□□□□□ -2.09
CNOT3O75175 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CNOT3O75175 AL157777.2-201ENST00000258070 137 ntBASIC2□□□□□ -2.09
CNOT3O75175 RNU6-862P-201ENST00000362804 105 ntBASIC2□□□□□ -2.09
CNOT3O75175 RNU6-674P-201ENST00000363831 107 ntBASIC2□□□□□ -2.09
CNOT3O75175 RNU6-1080P-201ENST00000383982 107 ntBASIC2□□□□□ -2.09
CNOT3O75175 Y_RNA.488-201ENST00000384403 102 ntBASIC2□□□□□ -2.09
CNOT3O75175 MIR520G-201ENST00000385064 90 ntBASIC2□□□□□ -2.09
CNOT3O75175 MIR504-201ENST00000385065 83 ntBASIC2□□□□□ -2.09
CNOT3O75175 SNORD37.2-201ENST00000391075 66 ntBASIC2□□□□□ -2.09
CNOT3O75175 SNORA79-201ENST00000408376 140 ntBASIC2□□□□□ -2.09
CNOT3O75175 TMSB4XP3-201ENST00000445144 114 ntBASIC2□□□□□ -2.09
CNOT3O75175 RNU1-131P-201ENST00000458943 161 ntBASIC2□□□□□ -2.09
CNOT3O75175 SNORD116-25-201ENST00000516517 92 ntBASIC2□□□□□ -2.09
CNOT3O75175 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2□□□□□ -2.09
CNOT3O75175 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2□□□□□ -2.09
CNOT3O75175 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
CNOT3O75175 AC100821.1-201ENST00000523153 2479 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 RNU6-199P-201ENST00000362954 107 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 RNU1-96P-201ENST00000364163 162 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 Y_RNA.343-201ENST00000365354 112 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 Y_RNA.400-201ENST00000383963 111 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 RNU6-643P-201ENST00000384018 107 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 Y_RNA.521-201ENST00000384560 114 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 MIR17-201ENST00000385012 84 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 MIR613-201ENST00000385248 95 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 RNU11-5P-201ENST00000391216 129 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 RNA5SP496-201ENST00000391240 109 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.99□□□□□ -2.09
CNOT3O75175 MIR2681-201ENST00000581814 105 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 Y_RNA.778-201ENST00000620203 90 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 MIR6132-201ENST00000622083 109 ntBASIC1.99□□□□□ -2.09
CNOT3O75175 ICE2P2-201ENST00000483823 2787 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 RNU6-1209P-201ENST00000363655 107 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 SNORD45.3-201ENST00000363836 72 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 RNU6-818P-201ENST00000364837 108 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 RNU4-11P-201ENST00000365287 132 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 Y_RNA.337-201ENST00000365312 102 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 RNY3P5-201ENST00000384127 102 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.98□□□□□ -2.09
CNOT3O75175 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CNOT3O75175 AP001485.1-201ENST00000604799 199 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 AC091895.1-201ENST00000624494 256 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 MIR6079-201ENST00000635807 62 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 MIR3658-201ENST00000636291 56 ntBASIC1.98□□□□□ -2.09
CNOT3O75175 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
CNOT3O75175 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.97□□□□□ -2.09
CNOT3O75175 RNU6-1164P-201ENST00000364428 107 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 SNORA16B-201ENST00000364674 135 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 RNU1-148P-201ENST00000384472 162 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 RNA5SP270-201ENST00000411361 118 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 RN7SKP101-201ENST00000411376 320 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 MLLT10P1-201ENST00000418346 262 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 AL445646.1-201ENST00000431784 216 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CNOT3O75175 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.97□□□□□ -2.09
CNOT3O75175 SNORA25.12-201ENST00000516202 82 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 RNU7-128P-201ENST00000517247 62 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 DNAJC19P2-201ENST00000593340 302 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.97□□□□□ -2.09
CNOT3O75175 AC132825.6-201ENST00000638861 357 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
CNOT3O75175 AC018630.2-201ENST00000534866 2403 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms