Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USP17L4A6NCW7 RNU6-1084P-201ENST00000362498 107 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 SNORD115-3-201ENST00000363100 82 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 snoU2-30.1-201ENST00000365012 70 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 MIR518F-201ENST00000384973 87 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 RNA5SP482-201ENST00000391269 118 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 MIR1261-201ENST00000408659 82 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 AC099677.2-201ENST00000436385 175 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 RNU6-781P-201ENST00000516377 101 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 RNU7-28P-201ENST00000516759 62 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 RNU6-1149P-201ENST00000516810 97 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 AC245166.1-201ENST00000521012 253 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 MIR6817-201ENST00000615588 66 ntBASIC3.35□□□□□ -1.87
USP17L4A6NCW7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP17L4A6NCW7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
USP17L4A6NCW7 SNORD77.3-201ENST00000391113 65 ntBASIC3.34□□□□□ -1.87
USP17L4A6NCW7 MIR548O-201ENST00000408583 114 ntBASIC3.34□□□□□ -1.87
USP17L4A6NCW7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.34□□□□□ -1.87
USP17L4A6NCW7 CYCTP-201ENST00000504253 315 ntBASIC3.34□□□□□ -1.87
USP17L4A6NCW7 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
USP17L4A6NCW7 RNU6-113P-201ENST00000516653 101 ntBASIC3.34□□□□□ -1.87
USP17L4A6NCW7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.34□□□□□ -1.87
USP17L4A6NCW7 AC005786.1-201ENST00000588553 154 ntBASIC3.34□□□□□ -1.87
USP17L4A6NCW7 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
USP17L4A6NCW7 AC025166.1-201ENST00000612411 163 ntBASIC3.34□□□□□ -1.87
USP17L4A6NCW7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.33□□□□□ -1.88
USP17L4A6NCW7 Y_RNA.265-201ENST00000364677 108 ntBASIC3.33□□□□□ -1.88
USP17L4A6NCW7 SNORD116-21-201ENST00000384507 92 ntBASIC3.33□□□□□ -1.88
USP17L4A6NCW7 MIR512-1-201ENST00000384913 84 ntBASIC3.33□□□□□ -1.88
USP17L4A6NCW7 RPL21P3-201ENST00000395517 478 ntBASIC3.33□□□□□ -1.88
USP17L4A6NCW7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP17L4A6NCW7 MIR5197-201ENST00000583721 112 ntBASIC3.33□□□□□ -1.88
USP17L4A6NCW7 AC006441.5-201ENST00000612680 209 ntBASIC3.33□□□□□ -1.88
USP17L4A6NCW7 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
USP17L4A6NCW7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP17L4A6NCW7 AC093831.2-201ENST00000624393 3427 ntBASIC3.33□□□□□ -1.88
USP17L4A6NCW7 RNU1-58P-201ENST00000362413 163 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 Y_RNA.410-201ENST00000383992 113 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 MIRLET7F2-201ENST00000385277 83 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.32□□□□□ -1.88
USP17L4A6NCW7 RNA5SP148-201ENST00000516527 94 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 MIR3126-201ENST00000577443 74 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 AC069114.2-201ENST00000604699 304 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 AL590808.1-201ENST00000618696 141 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 AC134878.1-201ENST00000619901 243 ntBASIC3.32□□□□□ -1.88
USP17L4A6NCW7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
USP17L4A6NCW7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.32□□□□□ -1.88
USP17L4A6NCW7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP17L4A6NCW7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
USP17L4A6NCW7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
USP17L4A6NCW7 RNU6-755P-201ENST00000364400 103 ntBASIC3.31□□□□□ -1.88
USP17L4A6NCW7 RNU1-91P-201ENST00000364746 163 ntBASIC3.31□□□□□ -1.88
USP17L4A6NCW7 SNORA67.4-201ENST00000384688 142 ntBASIC3.31□□□□□ -1.88
USP17L4A6NCW7 AC007064.1-201ENST00000412238 351 ntBASIC3.31□□□□□ -1.88
USP17L4A6NCW7 HMGN2P32-201ENST00000444648 269 ntBASIC3.31□□□□□ -1.88
USP17L4A6NCW7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.31□□□□□ -1.88
USP17L4A6NCW7 AP006437.1-201ENST00000641440 3685 ntBASIC3.31□□□□□ -1.88
USP17L4A6NCW7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP17L4A6NCW7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.3□□□□□ -1.88
USP17L4A6NCW7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP17L4A6NCW7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.3□□□□□ -1.88
USP17L4A6NCW7 Y_RNA.336-201ENST00000365307 109 ntBASIC3.3□□□□□ -1.88
USP17L4A6NCW7 SNORA22-201ENST00000383907 134 ntBASIC3.3□□□□□ -1.88
USP17L4A6NCW7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.3□□□□□ -1.88
USP17L4A6NCW7 AC008413.1-201ENST00000511864 177 ntBASIC3.3□□□□□ -1.88
USP17L4A6NCW7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.3□□□□□ -1.88
USP17L4A6NCW7 ZNF861P-201ENST00000588126 639 ntBASIC3.3□□□□□ -1.88
USP17L4A6NCW7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.3□□□□□ -1.88
USP17L4A6NCW7 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
USP17L4A6NCW7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.3□□□□□ -1.88
USP17L4A6NCW7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP17L4A6NCW7 RNU6-880P-201ENST00000384526 107 ntBASIC3.29□□□□□ -1.88
USP17L4A6NCW7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.29□□□□□ -1.88
USP17L4A6NCW7 AC063976.4-201ENST00000421971 163 ntBASIC3.29□□□□□ -1.88
USP17L4A6NCW7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
USP17L4A6NCW7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.29□□□□□ -1.88
USP17L4A6NCW7 RNU7-26P-201ENST00000458980 63 ntBASIC3.29□□□□□ -1.88
USP17L4A6NCW7 Y_RNA.649-201ENST00000459077 103 ntBASIC3.29□□□□□ -1.88
USP17L4A6NCW7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.29□□□□□ -1.88
USP17L4A6NCW7 RNU1-41P-201ENST00000516161 162 ntBASIC3.29□□□□□ -1.88
USP17L4A6NCW7 RNU1-48P-201ENST00000516400 162 ntBASIC3.29□□□□□ -1.88
USP17L4A6NCW7 SNORD45.4-201ENST00000516629 73 ntBASIC3.29□□□□□ -1.88
USP17L4A6NCW7 SCARNA15-202ENST00000516881 127 ntBASIC3.29□□□□□ -1.88
USP17L4A6NCW7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP17L4A6NCW7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.28□□□□□ -1.88
USP17L4A6NCW7 RNU6-1189P-201ENST00000383958 107 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 MIR887-201ENST00000401258 79 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 AC069257.2-201ENST00000441819 155 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 AL606517.2-201ENST00000442855 241 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 UBBP3-201ENST00000445497 241 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 RNU7-25P-201ENST00000516544 62 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 SNORA28-201ENST00000606769 126 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 AC022513.1-201ENST00000624512 117 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 MTND5P18-201ENST00000445624 1801 ntBASIC3.28□□□□□ -1.88
USP17L4A6NCW7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
USP17L4A6NCW7 RNA5SP432-201ENST00000362480 116 ntBASIC3.27□□□□□ -1.89
USP17L4A6NCW7 SNORD115-28-201ENST00000363931 81 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms